ST13P21 Gene (Pseudogene)

ST13, Hsp70 Interacting Protein Pseudogene 21

GC01P108502
GIFtS:
6
See more...

Aliases for ST13P21 Gene

Aliases for ST13P21 Gene

  • ST13, Hsp70 Interacting Protein Pseudogene 21 2 3 5
  • Suppression Of Tumorigenicity 13 (Colon Carcinoma) (Hsp70 Interacting Protein) Pseudogene 21 2 3
  • ST13P21 5

External Ids for ST13P21 Gene

Previous GeneCards Identifiers for ST13P21 Gene

  • GC01P109046
  • GC01P106938

Summaries for ST13P21 Gene

GeneCards Summary for ST13P21 Gene

ST13P21 (ST13, Hsp70 Interacting Protein Pseudogene 21) is a Pseudogene.

Additional gene information for ST13P21 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ST13P21 Gene

Genomics for ST13P21 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ST13P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J108501 Enhancer 1.1 Ensembl ENCODE 0.7 +2.0 2035 5 ARHGAP35 TEAD4 LEF1 IKZF1 ETV6 JUND MTA2 ZSCAN4 PKNOX1 MTA1 SLC25A24 PRPF38B ENSG00000228665 FAM102B ENSG00000244716 LOC100420170 ST13P21 NBPF6
GH01J108507 Enhancer 0.3 Ensembl 0.4 +5.5 5534 1.6 ZNF664 ATF2 ENSG00000226483 LOC100420170 lnc-NBPF6-7 FAM102B PRPF38B SLC25A24 ST13P21 NBPF6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ST13P21 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ST13P21 Gene

Genomic Locations for ST13P21 Gene
chr1:108,502,266-108,503,650
(GRCh38/hg38)
Size:
1,385 bases
Orientation:
Plus strand
chr1:109,044,980-109,046,077
(GRCh37/hg19)
Size:
1,098 bases
Orientation:
Plus strand

Genomic View for ST13P21 Gene

Genes around ST13P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ST13P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ST13P21 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for ST13P21 Gene

Proteins for ST13P21 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ST13P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ST13P21 Gene

Domains & Families for ST13P21 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ST13P21 Gene

Function for ST13P21 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST13P21 Gene

Localization for ST13P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ST13P21 Gene

Pathways & Interactions for ST13P21 Gene

PathCards logo

SuperPathways for ST13P21 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ST13P21 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ST13P21 Gene

Drugs & Compounds for ST13P21 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ST13P21 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ST13P21 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for ST13P21 Gene

No ASD Table

Relevant External Links for ST13P21 Gene

GeneLoc Exon Structure for
ST13P21

Expression for ST13P21 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ST13P21 Gene

mRNA expression in normal human tissues for ST13P21 Gene
mRNA expression by GTEx for ST13P21 Gene
genes like me logo Genes that share expression patterns with ST13P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST13P21 Gene

Orthologs for ST13P21 Gene

Evolution for ST13P21 Gene

ENSEMBL:
Gene Tree for ST13P21 (if available)
TreeFam:
Gene Tree for ST13P21 (if available)

No data available for Orthologs for ST13P21 Gene

Paralogs for ST13P21 Gene

No data available for Paralogs for ST13P21 Gene

Variants for ST13P21 Gene

Additional Variant Information for ST13P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ST13P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST13P21 Gene

Disorders for ST13P21 Gene

Additional Disease Information for ST13P21

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for ST13P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST13P21 Gene

Publications for ST13P21 Gene

No publications were found for ST13P21 Gene.

No data available for Mastermind for ST13P21 Gene

Products for ST13P21 Gene

Sources for ST13P21 Gene