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Aliases for ST13P20 Gene
Aliases for ST13P20 Gene
External Ids for ST13P20 Gene
- HGNC: 38863
- NCBI Entrez Gene: 729828
- Ensembl: ENSG00000215875
Previous GeneCards Identifiers for ST13P20 Gene
- GC01P082156
- GC01P080318
- GC01P082188
Summaries for ST13P20 Gene
GeneCards Summary for ST13P20 Gene
ST13P20 (ST13, Hsp70 Interacting Protein Pseudogene 20) is a Pseudogene.
Additional gene information for ST13P20 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ST13P20 Gene
Genomics for ST13P20 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for ST13P20 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J081719 | Enhancer | 0.2 | Ensembl | 250.7 | -1.6 | -1611 | 0.8 | ST13P20 lnc-PRKACB-11 LN871058 HSALNG0004717 ADGRL2 lnc-ADGRL2-4 | ||
| GH01J081678 | Enhancer | 1.2 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 5.5 | -40.6 | -40611 | 4.8 | ZNF217 IRF4 CTBP1 BATF SMARCE1 JUND NR2F1 DPF2 JUNB TCF12 | ST13P20 piR-39138-002 ENSG00000236676 ADGRL2 lnc-ADGRL2-4 | |
| GH01J081702 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE dbSUPER | 5.4 | -16.6 | -16611 | 6.4 | CEBPB MAFF EP300 EBF1 BATF MAFK JUND BACH1 SP7 GATA2 | ST13P20 LN871055 piR-39138-002 ADGRL2 lnc-ADGRL2-4 | |
| GH01J081698 | Promoter/Enhancer | 1.1 | EPDnew Ensembl ENCODE dbSUPER | 4.8 | -21.7 | -21711 | 2.2 | MAFK BACH1 EP300 JUND | ADGRL2 ST13P20 LN871055 piR-39138-002 lnc-ADGRL2-4 | |
| GH01J081716 | Enhancer | 0.5 | Ensembl dbSUPER | 0.7 | -4.2 | -4211 | 0.8 | CEBPB EP300 | ST13P20 LN871058 ADGRL2 lnc-ADGRL2-4 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ST13P20 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for ST13P20 Gene
Latest Assembly
- chr1:81,721,612-81,723,258
- (GRCh38/hg38)
- Size:
- 1,647 bases
- Orientation:
- Plus strand
Previous Assembly
- chr1:82,187,297-82,188,943
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 1,647 bases
- Orientation:
- Plus strand
- chr1:82,187,378-82,188,753
- (GRCh37/hg19 by Ensembl)
- Size:
- 1,376 bases
- Orientation:
- Plus strand
Genomic View for ST13P20 Gene
Genes around ST13P20 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p31.1 by HGNC
- 1p31.1 by Entrez Gene
- 1p31.1 by Ensembl
ST13P20 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for ST13P20 Gene
Proteins for ST13P20 Gene
Post-translational modifications for ST13P20 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ST13P20
- Origene Custom Protein Services for ST13P20
Assay products for research
No data available for DME Specific Peptides for ST13P20 Gene
Domains & Families for ST13P20 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ST13P20 Gene
Function for ST13P20 Gene
Phenotypes From GWAS Catalog for ST13P20 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ST13P20 - Starting at $85 >
- * ST13P20 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ST13P20
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ST13P20 Gene
Localization for ST13P20 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ST13P20 Gene
Transcripts for ST13P20 Gene
mRNA/cDNA for ST13P20 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000447996 1065 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for ST13P20 - Starting at $85 >
- * ST13P20 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for ST13P20
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for ST13P20 Gene
- GeneLoc Exon Structure for
- ST13P20
Expression for ST13P20 Gene
mRNA differential expression in normal tissues according to GTEx for ST13P20 Gene
This gene is overexpressed in Esophagus - Mucosa (x12.1), Vagina (x6.4), Cervix - Ectocervix (x5.2), Skin - Sun Exposed (Lower leg) (x5.2), and Skin - Not Sun Exposed (Suprapubic) (x4.6).
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ST13P20 Gene
Orthologs for ST13P20 Gene
No data available for Orthologs for ST13P20 Gene
Paralogs for ST13P20 Gene
No data available for Paralogs for ST13P20 Gene
Variants for ST13P20 Gene
Additional Variant Information for ST13P20 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- ST13P20
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ST13P20 Gene
Disorders for ST13P20 Gene
Additional Disease Information for ST13P20
No disorders were found for ST13P20 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ST13P20 Gene
Publications for ST13P20 Gene
No publications were found for ST13P20 Gene.
No data available for Mastermind for ST13P20 Gene
Products for ST13P20 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ST13P20
- Origene Custom Protein Services for ST13P20
- Browse OriGene Inhibitory RNA Products For ST13P20
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ST13P20
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ST13P20
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ST13P20
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ST13P20
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ST13P20
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ST13P20
Sources for ST13P20 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB