Aliases for SSBP3P2 Gene

Aliases for SSBP3P2 Gene

  • SSBP3 Pseudogene 2 2 3 5
  • Single Stranded DNA Binding Protein 3 Pseudogene 3
  • SSBP3P2 5

External Ids for SSBP3P2 Gene

Summaries for SSBP3P2 Gene

GeneCards Summary for SSBP3P2 Gene

SSBP3P2 (SSBP3 Pseudogene 2) is a Pseudogene.

Additional gene information for SSBP3P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SSBP3P2 Gene

Genomics for SSBP3P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SSBP3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J131353 Promoter 0.3 Ensembl 250.7 +0.2 237 0.4 SSBP3P2 lnc-RAB6D-16 piR-34066-003 RAB6D LOC100420006 ENSG00000284604 POTEE PLEKHB2
GH02J131394 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 10.9 -41.6 -41563 1.2 ELF1 GABPB1 SMARCA4 ETV1 EGR1 ZBTB33 NRF1 ZNF48 ELF3 ZBTB40 LOC112268425 MED15P3 lnc-RAB6D-6 SSBP3P2 FAR2P4 RAB6D TUBA3D
GH02J131299 Promoter 0.5 Ensembl 10.9 +53.0 53037 1.2 ZBTB33 CTCF KLF2P4 lnc-RAB6D-18 FAR2P4 SSBP3P2 MZT2A piR-51615 LOC440910 RAB6D POTEE PLEKHB2
GH02J130958 Enhancer 0.3 Ensembl 4.5 +395.3 395337 0.6 SPI1 SSBP3P2 MN309174-360 HSALNG0018852 SMIM39 ARHGEF4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SSBP3P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SSBP3P2 Gene

Latest Assembly
chr2:131,351,886-131,353,438
(GRCh38/hg38)
Size:
1,553 bases
Orientation:
Minus strand

Previous Assembly
chr2:132,109,459-132,111,011
(GRCh37/hg19 by Entrez Gene)
Size:
1,553 bases
Orientation:
Minus strand

chr2:132,109,787-132,110,812
(GRCh37/hg19 by Ensembl)
Size:
1,026 bases
Orientation:
Minus strand

Genomic View for SSBP3P2 Gene

Genes around SSBP3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SSBP3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SSBP3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SSBP3P2 Gene

Proteins for SSBP3P2 Gene

Post-translational modifications for SSBP3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SSBP3P2 Gene

Domains & Families for SSBP3P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SSBP3P2 Gene

Function for SSBP3P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SSBP3P2 Gene

Localization for SSBP3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SSBP3P2 Gene

Pathways & Interactions for SSBP3P2 Gene

PathCards logo

SuperPathways for SSBP3P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SSBP3P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SSBP3P2 Gene

Drugs & Compounds for SSBP3P2 Gene

No Compound Related Data Available

Transcripts for SSBP3P2 Gene

mRNA/cDNA for SSBP3P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SSBP3P2 Gene

No ASD Table

Relevant External Links for SSBP3P2 Gene

GeneLoc Exon Structure for
SSBP3P2

Expression for SSBP3P2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SSBP3P2 Gene

Orthologs for SSBP3P2 Gene

Evolution for SSBP3P2 Gene

ENSEMBL:
Gene Tree for SSBP3P2 (if available)
TreeFam:
Gene Tree for SSBP3P2 (if available)
Alliance of Genome Resources:
Additional Orthologs for SSBP3P2

No data available for Orthologs for SSBP3P2 Gene

Paralogs for SSBP3P2 Gene

No data available for Paralogs for SSBP3P2 Gene

Variants for SSBP3P2 Gene

Additional Variant Information for SSBP3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SSBP3P2
Leiden Open Variation Database (LOVD)
SSBP3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SSBP3P2 Gene

Disorders for SSBP3P2 Gene

No disorders were found for SSBP3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SSBP3P2 Gene

Publications for SSBP3P2 Gene

No publications were found for SSBP3P2 Gene.

No data available for Mastermind for SSBP3P2 Gene

Products for SSBP3P2 Gene

Sources for SSBP3P2 Gene