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SSBP3 (Single Stranded DNA Binding Protein 3) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include single-stranded DNA binding. An important paralog of this gene is SSBP2.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000978 | RNA polymerase II proximal promoter sequence-specific DNA binding | IBA | 21873635 |
GO:0003677 | DNA binding | IEA | -- |
GO:0003697 | single-stranded DNA binding | IEA | -- |
GO:0005515 | protein binding | IPI,IEA | 18330356 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005634 | nucleus | IBA | 21873635 |
GO:0005667 | transcription factor complex | IEA | -- |
GO:0032991 | protein-containing complex | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0002244 | hematopoietic progenitor cell differentiation | IEA | -- |
GO:0008284 | positive regulation of cell proliferation | IEA | -- |
GO:0021501 | prechordal plate formation | IEA | -- |
GO:0021547 | midbrain-hindbrain boundary initiation | IEA | -- |
GO:0045893 | positive regulation of transcription, DNA-templated | IEA | -- |
ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6a | · | 6b | · | 6c | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | |||||||||||||||||||||||||||||||
SP2: |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
cow (Bos Taurus) |
Mammalia | SSBP3 33 32 |
|
OneToOne | |
mouse (Mus musculus) |
Mammalia | Ssbp3 17 33 32 |
|
||
chimpanzee (Pan troglodytes) |
Mammalia | SSBP3 33 32 |
|
OneToOne | |
rat (Rattus norvegicus) |
Mammalia | Ssbp3 32 |
|
||
dog (Canis familiaris) |
Mammalia | SSBP3 33 32 |
|
OneToOne | |
platypus (Ornithorhynchus anatinus) |
Mammalia | SSBP3 33 |
|
OneToOne | |
chicken (Gallus gallus) |
Aves | SSBP3 33 32 |
|
OneToOne | |
lizard (Anolis carolinensis) |
Reptilia | SSBP3 33 |
|
OneToOne | |
tropical clawed frog (Silurana tropicalis) |
Amphibia | ssbp3 32 |
|
||
MGC75859 32 |
|
||||
African clawed frog (Xenopus laevis) |
Amphibia | ssbp3-prov 32 |
|
||
zebrafish (Danio rerio) |
Actinopterygii | ssbp3b 33 |
|
OneToMany | |
ssbp3a 33 32 |
|
OneToMany | |||
Dr.28337 32 |
|
||||
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP010909 32 |
|
||
fruit fly (Drosophila melanogaster) |
Insecta | Ssdp 33 32 |
|
OneToMany | |
worm (Caenorhabditis elegans) |
Secernentea | sam-10 33 |
|
OneToMany | |
sea squirt (Ciona savignyi) |
Ascidiacea | CSA.102 33 |
|
OneToMany | |
Cin.4608 32 |
|
||||
sea squirt (Ciona intestinalis) |
Ascidiacea | Cin.4608 32 |
|
SNP ID | Clin | Chr 01 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs1000016002 | -- | 54,394,954(-) | C/T | genic_upstream_transcript_variant, intron_variant | |
rs1000024669 | -- | 54,240,177(-) | G/A | intron_variant | |
rs1000032209 | -- | 54,283,237(-) | C/T | intron_variant | |
rs1000038275 | -- | 54,245,596(-) | A/T | intron_variant | |
rs1000044496 | -- | 54,349,253(-) | A/G | genic_upstream_transcript_variant, intron_variant |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv2748308 | CNV | deletion | 23290073 |
esv3423065 | CNV | duplication | 20981092 |
esv3586088 | CNV | loss | 21293372 |
nsv1078412 | CNV | deletion | 25765185 |
nsv1078417 | CNV | deletion | 25765185 |
nsv1112532 | CNV | deletion | 24896259 |
nsv1112533 | CNV | deletion | 24896259 |
nsv1118119 | CNV | deletion | 24896259 |
nsv1122346 | CNV | deletion | 24896259 |
nsv461550 | CNV | loss | 19166990 |
nsv461561 | CNV | gain | 19166990 |
nsv470713 | CNV | loss | 18288195 |
nsv472617 | CNV | novel sequence insertion | 20440878 |
nsv509291 | CNV | insertion | 20534489 |
nsv546266 | CNV | gain | 21841781 |
nsv822631 | CNV | gain | 20364138 |
nsv829893 | CNV | loss | 17160897 |
No disorders were found for SSBP3 Gene.