Aliases for SRMP2 Gene

Aliases for SRMP2 Gene

  • SRM Pseudogene 2 2 3
  • Spermidine Synthase Pseudogene 2 2 3 5

External Ids for SRMP2 Gene

Previous GeneCards Identifiers for SRMP2 Gene

  • GC14U900034
  • GC14M059375
  • GC14M060455
  • GC14M061385

Summaries for SRMP2 Gene

GeneCards Summary for SRMP2 Gene

SRMP2 (SRM Pseudogene 2) is a Pseudogene.

Additional gene information for SRMP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SRMP2 Gene

Genomics for SRMP2 Gene

GeneHancer (GH) Regulatory Elements for SRMP2 Gene

Promoters and enhancers for SRMP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J060922 Enhancer 0.5 Ensembl 500.7 -1.8 -1838 0.4 ATF2 MAFK FOS JUND PRDM6 SP7 SRMP2 RNU6-398P SIX4 piR-39341-130 ENSG00000258892 MNAT1
GH14J061747 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4 -831.8 -831761 9.4 ZBTB40 CTCF ZSCAN5C SIN3A NRF1 TCF12 MYC POLR2G USF1 PHF8 HIF1A-AS3 SNAPC1 ENSG00000232774 SRMP2 HIF1A HIF1A-AS2 NONHSAG015183.2 lnc-TMEM30B-8 ENSG00000258964
GH14J060934 Enhancer 0.6 Ensembl 0.4 -14.4 -14438 0.8 NCOR1 TRIM24 TAL1 HDAC2 FOXM1 CHAMP1 TCF12 DPF2 SP1 TEAD4 SLC38A6 TRMT5 piR-39341-130 SRMP2 ENSG00000258892 MNAT1
GH14J060924 Enhancer 0.5 Ensembl 0.4 -5.2 -5238 1.6 RELA TCF12 ATF2 ATF7 POLR2A CREM ETV6 RUNX3 SKIL RNU6-398P HIF1A-AS1 SRMP2 piR-39341-130 ENSG00000258892 MNAT1
GH14J060929 Enhancer 0.5 Ensembl ENCODE 0.4 -10.9 -10908 2.9 FOXA1 PRDM1 RNU6-398P SIX4 piR-39341-130 SRMP2 ENSG00000258892 MNAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SRMP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SRMP2 Gene

Genomic Locations for SRMP2 Gene
chr14:60,918,982-60,920,163
(GRCh38/hg38)
Size:
1,182 bases
Orientation:
Minus strand
chr14:61,385,700-61,386,881
(GRCh37/hg19)
Size:
1,182 bases
Orientation:
Minus strand

Genomic View for SRMP2 Gene

Genes around SRMP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRMP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRMP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SRMP2 Gene

Proteins for SRMP2 Gene

Post-translational modifications for SRMP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRMP2 Gene

Domains & Families for SRMP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SRMP2 Gene

Function for SRMP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRMP2 Gene

Localization for SRMP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SRMP2 Gene

Pathways & Interactions for SRMP2 Gene

PathCards logo

SuperPathways for SRMP2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SRMP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SRMP2 Gene

Drugs & Compounds for SRMP2 Gene

No Compound Related Data Available

Transcripts for SRMP2 Gene

mRNA/cDNA for SRMP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SRMP2 Gene

No ASD Table

Relevant External Links for SRMP2 Gene

GeneLoc Exon Structure for
SRMP2

Expression for SRMP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SRMP2 Gene

genes like me logo Genes that share expression patterns with SRMP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRMP2 Gene

Orthologs for SRMP2 Gene

Evolution for SRMP2 Gene

ENSEMBL:
Gene Tree for SRMP2 (if available)
TreeFam:
Gene Tree for SRMP2 (if available)

No data available for Orthologs for SRMP2 Gene

Paralogs for SRMP2 Gene

No data available for Paralogs for SRMP2 Gene

Variants for SRMP2 Gene

Additional Variant Information for SRMP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRMP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SRMP2 Gene

Disorders for SRMP2 Gene

No disorders were found for SRMP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SRMP2 Gene

Publications for SRMP2 Gene

No publications were found for SRMP2 Gene.

Products for SRMP2 Gene

Sources for SRMP2 Gene