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Aliases for SRGAP3-AS1 Gene

Subcategory (RNA class) for SRGAP3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SRGAP3-AS1 Gene

  • SRGAP3 Antisense RNA 1 2 3 5
  • SRGAP3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SRGAP3-AS1 Gene

Previous GeneCards Identifiers for SRGAP3-AS1 Gene

  • GC00U933886

Summaries for SRGAP3-AS1 Gene

GeneCards Summary for SRGAP3-AS1 Gene

SRGAP3-AS1 (SRGAP3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SRGAP3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SRGAP3-AS1 Gene

Genomics for SRGAP3-AS1 Gene

GeneHancer (GH) Regulatory Elements for SRGAP3-AS1 Gene

Promoters and enhancers for SRGAP3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I008987 Enhancer 0.8 Ensembl ENCODE 11.1 -26.2 -26202 1.2 SMARCA5 CTCF TFAP4 ZNF654 MAX TRIM22 DACH1 SIN3A REST ELF1 RAD18 SRGAP3-AS1 SRGAP3
GH03I009279 Enhancer 0.7 ENCODE 10 +266.3 266274 1.2 CTCF ESRRA PKNOX1 RFX1 SIN3A BMI1 ZIC2 OSR2 ZNF335 ZFHX2 SRGAP3 SRGAP3-AS1 ENSG00000254485 ENSG00000231401 GC03M009298 SRGAP3-AS4
GH03I009110 Enhancer 0.4 ENCODE 10.9 +97.5 97523 1.7 CTCF ZNF189 ZNF143 SRGAP3-AS1 SRGAP3 GC03P009098 SRGAP3-AS2
GH03I009090 Enhancer 0.4 ENCODE 10.3 +77.8 77770 2 DACH1 MNT SRGAP3 SRGAP3-AS1 GC03P009098 GC03M009001
GH03I008990 Enhancer 0.2 ENCODE 11.1 -23.4 -23419 0.2 RAD18 SRGAP3-AS1 SRGAP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SRGAP3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SRGAP3-AS1 Gene

Genomic Locations for SRGAP3-AS1 Gene
chr3:9,014,123-9,015,979
(GRCh38/hg38)
Size:
1,857 bases
Orientation:
Plus strand
chr3:9,055,807-9,057,663
(GRCh37/hg19)

Genomic View for SRGAP3-AS1 Gene

Genes around SRGAP3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SRGAP3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SRGAP3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SRGAP3-AS1 Gene

Proteins for SRGAP3-AS1 Gene

Post-translational modifications for SRGAP3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SRGAP3-AS1 Gene

Domains & Families for SRGAP3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SRGAP3-AS1 Gene

Function for SRGAP3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SRGAP3-AS1 Gene

Localization for SRGAP3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SRGAP3-AS1 Gene

Pathways & Interactions for SRGAP3-AS1 Gene

SuperPathways for SRGAP3-AS1 Gene

No Data Available

Interacting Proteins for SRGAP3-AS1 Gene

Gene Ontology (GO) - Biological Process for SRGAP3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SRGAP3-AS1 Gene

Drugs & Compounds for SRGAP3-AS1 Gene

No Compound Related Data Available

Transcripts for SRGAP3-AS1 Gene

mRNA/cDNA for SRGAP3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SRGAP3-AS1 Gene

No ASD Table

Relevant External Links for SRGAP3-AS1 Gene

GeneLoc Exon Structure for
SRGAP3-AS1
ECgene alternative splicing isoforms for
SRGAP3-AS1

Expression for SRGAP3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SRGAP3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SRGAP3-AS1 Gene

This gene is overexpressed in Testis (x30.2), Brain - Cerebellum (x5.8), and Brain - Spinal cord (cervical c-1) (x4.7).
genes like me logo Genes that share expression patterns with SRGAP3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SRGAP3-AS1 Gene

Orthologs for SRGAP3-AS1 Gene

Evolution for SRGAP3-AS1 Gene

ENSEMBL:
Gene Tree for SRGAP3-AS1 (if available)
TreeFam:
Gene Tree for SRGAP3-AS1 (if available)

No data available for Orthologs for SRGAP3-AS1 Gene

Paralogs for SRGAP3-AS1 Gene

No data available for Paralogs for SRGAP3-AS1 Gene

Variants for SRGAP3-AS1 Gene

Additional Variant Information for SRGAP3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SRGAP3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SRGAP3-AS1 Gene

Disorders for SRGAP3-AS1 Gene

No disorders were found for SRGAP3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SRGAP3-AS1 Gene

Publications for SRGAP3-AS1 Gene

No publications were found for SRGAP3-AS1 Gene.

Products for SRGAP3-AS1 Gene

Sources for SRGAP3-AS1 Gene

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