Aliases for SPTLC1P1 Gene

Aliases for SPTLC1P1 Gene

  • Serine Palmitoyltransferase Long Chain Base Subunit 1 Pseudogene 1 2 3 5
  • SPTLC1P1 5

External Ids for SPTLC1P1 Gene

Previous GeneCards Identifiers for SPTLC1P1 Gene

  • GC00U931771
  • GC10P031650

Summaries for SPTLC1P1 Gene

GeneCards Summary for SPTLC1P1 Gene

SPTLC1P1 (Serine Palmitoyltransferase Long Chain Base Subunit 1 Pseudogene 1) is a Pseudogene.

Additional gene information for SPTLC1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SPTLC1P1 Gene

Genomics for SPTLC1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SPTLC1P1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SPTLC1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SPTLC1P1 Gene

Latest Assembly
303 bases
Plus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
302 bases
Plus strand

(GRCh37/hg19 by Ensembl)
261 bases
Plus strand

Genomic View for SPTLC1P1 Gene

Genes around SPTLC1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPTLC1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPTLC1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPTLC1P1 Gene

Proteins for SPTLC1P1 Gene

Post-translational modifications for SPTLC1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPTLC1P1 Gene

Domains & Families for SPTLC1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SPTLC1P1 Gene

Function for SPTLC1P1 Gene

Phenotypes From GWAS Catalog for SPTLC1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPTLC1P1 Gene

Localization for SPTLC1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SPTLC1P1 Gene

Pathways & Interactions for SPTLC1P1 Gene

PathCards logo

SuperPathways for SPTLC1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SPTLC1P1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SPTLC1P1 Gene

Drugs & Compounds for SPTLC1P1 Gene

No Compound Related Data Available

Transcripts for SPTLC1P1 Gene

mRNA/cDNA for SPTLC1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPTLC1P1 Gene

No ASD Table

Relevant External Links for SPTLC1P1 Gene

GeneLoc Exon Structure for

Expression for SPTLC1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SPTLC1P1 Gene

genes like me logo Genes that share expression patterns with SPTLC1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPTLC1P1 Gene

Orthologs for SPTLC1P1 Gene

Evolution for SPTLC1P1 Gene

Gene Tree for SPTLC1P1 (if available)
Gene Tree for SPTLC1P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for SPTLC1P1

No data available for Orthologs for SPTLC1P1 Gene

Paralogs for SPTLC1P1 Gene

No data available for Paralogs for SPTLC1P1 Gene

Variants for SPTLC1P1 Gene

Additional Variant Information for SPTLC1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPTLC1P1 Gene

Disorders for SPTLC1P1 Gene

No disorders were found for SPTLC1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPTLC1P1 Gene

Publications for SPTLC1P1 Gene

No publications were found for SPTLC1P1 Gene.

No data available for Mastermind for SPTLC1P1 Gene

Products for SPTLC1P1 Gene

Sources for SPTLC1P1 Gene