Aliases for SPON1-AS1 Gene

Data sources for SPON1-AS1 Gene:

Subcategory (RNA class) for SPON1-AS1 Gene


Aliases for SPON1-AS1 Gene

External Ids for SPON1-AS1 Gene

Summaries for SPON1-AS1 Gene

GeneCards Summary for SPON1-AS1 Gene

SPON1-AS1 (SPON1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for SPON1-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SPON1-AS1 Gene

Genomics for SPON1-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SPON1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J014274 Enhancer 0.3 Ensembl ENCODE 250.7 -1.0 -1015 1.1 SPON1-AS1 L13714-048 RRAS2 SPON1
GH11J014421 Enhancer 1.1 FANTOM5 ENCODE 10.8 -149.0 -148964 3.8 MNT DEK IKZF1 BHLHE40 ZIC2 SIN3A ZNF395 MAX VEZF1 MAFF SPON1-AS1 SPON1 COPB1 RRAS2 piR-57176-080 HSALNG0082807
GH11J014307 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.2 -38.1 -38136 8.8 FEZF1 CTCF TRIM22 ZNF341 SMC3 RAD21 ZNF843 SMARCA5 ZNF316 PRDM6 SPON1-AS1 RRAS2 L13714-048 HSALNG0082802 SPON1
GH11J014322 Enhancer 0.9 ENCODE dbSUPER 11 -50.9 -50897 6.2 MAFF ZNF316 PRDM6 ASH2L BATF MAFK ZBTB33 ZNF362 IKZF1 HDGF L13714-048 SPON1-AS1 RRAS2 HSALNG0082802 SPON1
GH11J014248 Enhancer 0.8 Ensembl ENCODE 12 +25.5 25456 2.3 CTCF REST TRIM22 SMC3 RAD21 KLF9 ZNF143 GLIS1 TRIM28 PKNOX1 SPON1-AS1 SPON1 piR-42491-026 RRAS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SPON1-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SPON1-AS1 Gene

Latest Assembly
11,357 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Ensembl)
10,846 bases
Minus strand

Genomic View for SPON1-AS1 Gene

Genes around SPON1-AS1 on UCSC Golden Path with GeneCards custom track
SPON1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
SPON1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPON1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SPON1-AS1 Gene

Proteins for SPON1-AS1 Gene

Post-translational modifications for SPON1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPON1-AS1 Gene

Domains & Families for SPON1-AS1 Gene

Gene Families for SPON1-AS1 Gene

genes like me logo Genes that share domains with SPON1-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SPON1-AS1 Gene

Function for SPON1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPON1-AS1 Gene

Localization for SPON1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SPON1-AS1 Gene

Pathways & Interactions for SPON1-AS1 Gene

PathCards logo

SuperPathways for SPON1-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SPON1-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SPON1-AS1 Gene

Drugs & Compounds for SPON1-AS1 Gene

No Compound Related Data Available

Transcripts for SPON1-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SPON1-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000015695_9606 lncRNA 240 3

Ensembl: ENST00000534587 (view in UCSC) ,

LNCipedia: SPON1-AS1:3,


URS00009C3A1B_9606 lncRNA 240 2

LncBook: HSALNT0172352,


URS0001BEC383_9606 lncRNA 749 1

LncBook: HSALNT0172353,

URS0000EA48E4_9606 lncRNA 242 1

LncBook: HSALNT0289403,

SPON1-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for SPON1-AS1 Gene

No ASD Table

Relevant External Links for SPON1-AS1 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for SPON1-AS1 Gene

Expression for SPON1-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPON1-AS1 Gene

Orthologs for SPON1-AS1 Gene

Evolution for SPON1-AS1 Gene

Gene Tree for SPON1-AS1 (if available)
Gene Tree for SPON1-AS1 (if available)

No data available for Orthologs for SPON1-AS1 Gene

Paralogs for SPON1-AS1 Gene

No data available for Paralogs for SPON1-AS1 Gene

Variants for SPON1-AS1 Gene

Additional Variant Information for SPON1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPON1-AS1 Gene

Disorders for SPON1-AS1 Gene

Additional Disease Information for SPON1-AS1

Open Targets Platform
Open Targets Platform

No disorders were found for SPON1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPON1-AS1 Gene

Publications for SPON1-AS1 Gene

  1. Discovery and validation of immune-associated long non-coding RNA biomarkers associated with clinically molecular subtype and prognosis in diffuse large B cell lymphoma. (PMID: 28103885) Zhou M … Sun J (Molecular cancer 2017) 2 3

Products for SPON1-AS1 Gene

Sources for SPON1-AS1 Gene