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Aliases for SPDYE12P Gene

Aliases for SPDYE12P Gene

  • Speedy/RINGO Cell Cycle Regulator Family Member E12, Pseudogene 2 3 5

External Ids for SPDYE12P Gene

Summaries for SPDYE12P Gene

GeneCards Summary for SPDYE12P Gene

SPDYE12P (Speedy/RINGO Cell Cycle Regulator Family Member E12, Pseudogene) is a Pseudogene.

Additional gene information for SPDYE12P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPDYE12P Gene

Genomics for SPDYE12P Gene

GeneHancer (GH) Regulatory Elements for SPDYE12P Gene

Promoters and enhancers for SPDYE12P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I074653 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 7.1 +253.9 253925 11.3 CLOCK MLX ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC SSRP1 ZNF610 GTF2I GC07P074660 STAG3L2 NSUN5P1 PMS2P3 PMS2P2 PMS2P5 SPDYE12P GTF2IRD2 LAT2
GH07I074635 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 9.7 +277.2 277220 2 PKNOX1 FOXA2 ZFP64 ARID4B SIN3A ZNF48 ETS1 FOS ZNF202 REST PMS2P3 STAG3L1 NSUN5P1 MIR590 SPDYE5 METTL27 GTF2IRD2 GTF2IRD2B LOC101926943 BUD23
GH07I074648 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 6.5 +263.2 263172 2.6 HDGF ATF1 IRF4 TCF12 RUNX3 NCOA1 MEF2D ATF4 SMARCA4 ZNF184 STAG3L2 LAT2 PMS2P2 SPDYE12P GTF2IRD2 GTF2IRD2B GTF2I ENSG00000279005
GH07I074889 Promoter/Enhancer 1.4 Ensembl ENCODE 6.8 +22.9 22855 2.4 ATF1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF48 POLR2B GLIS2 ATF7 STAG3L2 PMS2P5 SPDYE12P GTF2IRD2
GH07I075526 Promoter/Enhancer 1.5 Ensembl ENCODE 4.7 -614.6 -614569 2.3 CLOCK ARNT ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF766 CBX5 PMS2P3 SPDYE12P GTF2IRD2 GC07M075514 ENSG00000200874
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SPDYE12P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SPDYE12P Gene

Genomic Locations for SPDYE12P Gene
chr7:74,904,301-74,913,256
(GRCh38/hg38)
Size:
8,956 bases
Orientation:
Minus strand
chr7:74,320,406-74,331,163
(GRCh37/hg19)

Genomic View for SPDYE12P Gene

Genes around SPDYE12P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPDYE12P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPDYE12P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPDYE12P Gene

Proteins for SPDYE12P Gene

Post-translational modifications for SPDYE12P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPDYE12P Gene

Domains & Families for SPDYE12P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPDYE12P Gene

Function for SPDYE12P Gene

Phenotypes From GWAS Catalog for SPDYE12P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPDYE12P Gene

Localization for SPDYE12P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SPDYE12P Gene

Pathways & Interactions for SPDYE12P Gene

SuperPathways for SPDYE12P Gene

No Data Available

Interacting Proteins for SPDYE12P Gene

Gene Ontology (GO) - Biological Process for SPDYE12P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPDYE12P Gene

Drugs & Compounds for SPDYE12P Gene

No Compound Related Data Available

Transcripts for SPDYE12P Gene

mRNA/cDNA for SPDYE12P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPDYE12P Gene

No ASD Table

Relevant External Links for SPDYE12P Gene

GeneLoc Exon Structure for
SPDYE12P
ECgene alternative splicing isoforms for
SPDYE12P

Expression for SPDYE12P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SPDYE12P Gene

NURSA nuclear receptor signaling pathways regulating expression of SPDYE12P Gene:

SPDYE12P
genes like me logo Genes that share expression patterns with SPDYE12P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPDYE12P Gene

Orthologs for SPDYE12P Gene

Evolution for SPDYE12P Gene

ENSEMBL:
Gene Tree for SPDYE12P (if available)
TreeFam:
Gene Tree for SPDYE12P (if available)

No data available for Orthologs for SPDYE12P Gene

Paralogs for SPDYE12P Gene

No data available for Paralogs for SPDYE12P Gene

Variants for SPDYE12P Gene

Additional Variant Information for SPDYE12P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SPDYE12P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPDYE12P Gene

Disorders for SPDYE12P Gene

No disorders were found for SPDYE12P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPDYE12P Gene

Publications for SPDYE12P Gene

No publications were found for SPDYE12P Gene.

Products for SPDYE12P Gene

Sources for SPDYE12P Gene

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