Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SPATA31B1P Gene

Aliases for SPATA31B1P Gene

  • SPATA31 Subfamily B Member 1, Pseudogene 2 3 5
  • Family With Sequence Similarity 75, Member B 2 3
  • Chromosome 9 Open Reading Frame 36B 2
  • SPATA31 Subfamily B, Member 1 2
  • SPATA31B1 3
  • C9orf36B 3
  • FAM75B 3

External Ids for SPATA31B1P Gene

Previous HGNC Symbols for SPATA31B1P Gene

  • C9orf36B
  • FAM75B
  • SPATA31B1

Previous GeneCards Identifiers for SPATA31B1P Gene

  • GC09M084979

Summaries for SPATA31B1P Gene

GeneCards Summary for SPATA31B1P Gene

SPATA31B1P (SPATA31 Subfamily B Member 1, Pseudogene) is a Pseudogene.

Additional gene information for SPATA31B1P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA31B1P Gene

Genomics for SPATA31B1P Gene

GeneHancer (GH) Regulatory Elements for SPATA31B1P Gene

Promoters and enhancers for SPATA31B1P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J082020 Enhancer 0.7 Ensembl ENCODE 11 +42.0 41986 1.9 JUND ZNF189 POLR2A FOS TRIM28 SPATA31B1P GC09P082014 PIR46808 ENSG00000228430 LOC105376107
GH09J082148 Enhancer 0.7 ENCODE 11 -85.3 -85347 1.3 KLF1 ARNT MZF1 FEZF1 ZNF366 POLR2A PRDM10 RCOR1 ZNF600 CHD2 SPATA31B1P GC09P082135 GC09P082236 ENSG00000228430 LOC105376107
GH09J082031 Enhancer 0.6 ENCODE 11.6 +31.7 31706 0.9 PKNOX1 CLOCK USF1 USF2 MAX SIN3A ELF1 MNT GABPA GATA3 SPATA31B1P GC09P082014 PIR46808 LOC105376107 ENSG00000228430
GH09J082088 Promoter 0.5 Ensembl 12.2 -25.0 -24977 0.2 DDX10P2 SPATA31B1P LOC105376107 ENSG00000228430
GH09J082117 Enhancer 0.2 ENCODE 10.7 -53.9 -53899 0.1 SPATA31B1P GC09M082853 RPS2P34 ENSG00000228430 LOC105376107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SPATA31B1P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SPATA31B1P Gene

Genomic Locations for SPATA31B1P Gene
chr9:82,057,542-82,063,724
(GRCh38/hg38)
Size:
6,183 bases
Orientation:
Minus strand
chr9:84,672,562-84,678,639
(GRCh37/hg19)

Genomic View for SPATA31B1P Gene

Genes around SPATA31B1P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPATA31B1P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPATA31B1P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA31B1P Gene

Proteins for SPATA31B1P Gene

Post-translational modifications for SPATA31B1P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPATA31B1P Gene

Domains & Families for SPATA31B1P Gene

Suggested Antigen Peptide Sequences for SPATA31B1P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SPATA31B1P Gene

Function for SPATA31B1P Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPATA31B1P Gene

Localization for SPATA31B1P Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SPATA31B1P gene
Compartment Confidence
nucleus 2
cytosol 2
extracellular 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SPATA31B1P Gene

Pathways & Interactions for SPATA31B1P Gene

SuperPathways for SPATA31B1P Gene

No Data Available

Interacting Proteins for SPATA31B1P Gene

Gene Ontology (GO) - Biological Process for SPATA31B1P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPATA31B1P Gene

Drugs & Compounds for SPATA31B1P Gene

No Compound Related Data Available

Transcripts for SPATA31B1P Gene

mRNA/cDNA for SPATA31B1P Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA31B1P Gene

No ASD Table

Relevant External Links for SPATA31B1P Gene

GeneLoc Exon Structure for
SPATA31B1P
ECgene alternative splicing isoforms for
SPATA31B1P

Expression for SPATA31B1P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SPATA31B1P Gene

mRNA differential expression in normal tissues according to GTEx for SPATA31B1P Gene

This gene is overexpressed in Testis (x31.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for SPATA31B1P Gene



NURSA nuclear receptor signaling pathways regulating expression of SPATA31B1P Gene:

SPATA31B1P
genes like me logo Genes that share expression patterns with SPATA31B1P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SPATA31B1P Gene

Orthologs for SPATA31B1P Gene

Evolution for SPATA31B1P Gene

ENSEMBL:
Gene Tree for SPATA31B1P (if available)
TreeFam:
Gene Tree for SPATA31B1P (if available)

No data available for Orthologs for SPATA31B1P Gene

Paralogs for SPATA31B1P Gene

No data available for Paralogs for SPATA31B1P Gene

Variants for SPATA31B1P Gene

Additional Variant Information for SPATA31B1P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SPATA31B1P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SPATA31B1P Gene

Disorders for SPATA31B1P Gene

No disorders were found for SPATA31B1P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SPATA31B1P Gene

Publications for SPATA31B1P Gene

No publications were found for SPATA31B1P Gene.

Products for SPATA31B1P Gene

Sources for SPATA31B1P Gene

Content
Loading form....