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SPARCL1 (SPARC Like 1) is a Protein Coding gene. Diseases associated with SPARCL1 include Entropion. Gene Ontology (GO) annotations related to this gene include calcium ion binding. An important paralog of this gene is SPARC.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005509 | calcium ion binding | IBA | 21873635 |
GO:0005515 | protein binding | IPI | 20926826 |
GO:0005518 | collagen binding | IBA | 21873635 |
GO:0046872 | metal ion binding | IEA | -- |
GO:0050840 | extracellular matrix binding | IBA | 21873635 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005576 | extracellular region | HDA | 27068509 |
GO:0005615 | extracellular space | IBA | 21873635 |
GO:0005788 | endoplasmic reticulum lumen | TAS | -- |
GO:0062023 | collagen-containing extracellular matrix | IEA | -- |
GO:0098978 | glutamatergic synapse | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0007165 | signal transduction | IEA | -- |
GO:0043687 | post-translational protein modification | TAS | -- |
GO:0044267 | cellular protein metabolic process | TAS | -- |
GO:0048856 | anatomical structure development | IBA | 21873635 |
GO:0099560 | synaptic membrane adhesion | IEA | -- |
ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | ^ | 7a | · | 7b | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | |||||||||||||||||||||||||||||||||||||||||
SP2: | - | ||||||||||||||||||||||||||||||||||||||||
SP3: | - | - | - | - | |||||||||||||||||||||||||||||||||||||
SP4: | - | ||||||||||||||||||||||||||||||||||||||||
SP5: | |||||||||||||||||||||||||||||||||||||||||
SP6: | - | ||||||||||||||||||||||||||||||||||||||||
SP7: | - | - | - | - | - | - | - | - |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | SPARCL1 30 31 |
|
OneToOne | |
Dog (Canis familiaris) |
Mammalia | SPARCL1 30 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | SPARCL1 30 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Sparcl1 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Sparcl1 30 17 31 |
|
OneToOne | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | SPARCL1 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | SPARCL1 31 |
|
OneToOne | |
Zebrafish (Danio rerio) |
Actinopterygii | sparcl1 31 |
|
OneToOne | |
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP000305 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | BM-40-SPARC 30 31 |
|
OneToMany | |
Worm (Caenorhabditis elegans) |
Secernentea | ost-1 30 31 |
|
OneToMany | |
Sea Squirt (Ciona savignyi) |
Ascidiacea | -- 31 |
|
OneToMany |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3601276 | CNV | loss | 21293372 |
esv3601278 | CNV | loss | 21293372 |
esv3601279 | CNV | loss | 21293372 |
nsv1002789 | CNV | loss | 25217958 |
nsv1011882 | CNV | gain | 25217958 |
Disorder | Aliases | PubMed IDs |
---|---|---|
entropion |
|
|