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Aliases for SORD2P Gene

Aliases for SORD2P Gene

  • Sorbitol Dehydrogenase 2, Pseudogene 2 3 5
  • SORD Pseudogene 3
  • SORD2 3

External Ids for SORD2P Gene

Previous GeneCards Identifiers for SORD2P Gene

  • GC15M045118

Summaries for SORD2P Gene

GeneCards Summary for SORD2P Gene

SORD2P (Sorbitol Dehydrogenase 2, Pseudogene) is a Pseudogene.

Additional gene information for SORD2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SORD2P Gene

Genomics for SORD2P Gene

GeneHancer (GH) Regulatory Elements for SORD2P Gene

Promoters and enhancers for SORD2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I044838 Enhancer 0.8 Ensembl ENCODE dbSUPER 14.3 +45.5 45541 0.9 JUN IKZF1 IKZF2 SORD2P SORD GC15P044844 ENSG00000259187
GH15I045068 Enhancer 0.6 ENCODE dbSUPER 10.8 -185.2 -185226 1.9 KDM1A MLLT1 SORD2P ENSG00000259187 ENSG00000259352 ENSG00000259418 SORD
GH15I044829 Enhancer 1.3 Ensembl ENCODE dbSUPER 4.9 +54.2 54234 2.7 ATF1 FOXA2 ARID4B ZNF48 SP5 NFYC ZNF592 KAT8 NFIL3 MIER3 DUOXA1 DUOX1 SORD2P SLC30A4 ENSG00000259187 GC15P044844
GH15I045704 Promoter/Enhancer 1.3 Ensembl ENCODE 4.2 -820.5 -820524 2.4 RB1 SIN3A KLF5 RAD21 YY1 ZNF335 ZNF366 ZNF207 ZNF143 SMARCC2 LOC105370802 SQOR SORD2P GC15P045703 GC15M045750
GH15I045447 Enhancer 1.1 Ensembl ENCODE dbSUPER 4.2 -565.0 -564984 3.6 ZNF687 SMARCC1 NFIA ZNF189 CEBPB EBF1 MNT CEBPG DPF2 ZIC2 ENSG00000259354 LOC105376714 SPATA5L1 SLC30A4 ENSG00000259539 LOC101928414 LOC100533853 SORD2P GC15P045452 C15orf48
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SORD2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for SORD2P Gene

Genomic Locations for SORD2P Gene
chr15:44,825,499-44,884,694
(GRCh38/hg38)
Size:
59,196 bases
Orientation:
Minus strand
chr15:45,117,697-45,176,892
(GRCh37/hg19)

Genomic View for SORD2P Gene

Genes around SORD2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SORD2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SORD2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SORD2P Gene

Proteins for SORD2P Gene

Post-translational modifications for SORD2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SORD2P Gene

Domains & Families for SORD2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SORD2P Gene

Function for SORD2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SORD2P Gene

Localization for SORD2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SORD2P Gene

Pathways & Interactions for SORD2P Gene

SuperPathways for SORD2P Gene

No Data Available

Interacting Proteins for SORD2P Gene

Gene Ontology (GO) - Biological Process for SORD2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SORD2P Gene

Drugs & Compounds for SORD2P Gene

No Compound Related Data Available

Transcripts for SORD2P Gene

mRNA/cDNA for SORD2P Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SORD2P Gene

No ASD Table

Relevant External Links for SORD2P Gene

GeneLoc Exon Structure for
SORD2P
ECgene alternative splicing isoforms for
SORD2P

Expression for SORD2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SORD2P Gene

mRNA differential expression in normal tissues according to GTEx for SORD2P Gene

This gene is overexpressed in Liver (x8.3), Prostate (x6.9), Thyroid (x6.4), and Kidney - Cortex (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of SORD2P Gene:

SORD2P
genes like me logo Genes that share expression patterns with SORD2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SORD2P Gene

Orthologs for SORD2P Gene

Evolution for SORD2P Gene

ENSEMBL:
Gene Tree for SORD2P (if available)
TreeFam:
Gene Tree for SORD2P (if available)

No data available for Orthologs for SORD2P Gene

Paralogs for SORD2P Gene

No data available for Paralogs for SORD2P Gene

Variants for SORD2P Gene

Additional Variant Information for SORD2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SORD2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SORD2P Gene

Disorders for SORD2P Gene

Additional Disease Information for SORD2P

No disorders were found for SORD2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SORD2P Gene

Publications for SORD2P Gene

  1. Structural and evolutionary characterization of the human sorbitol dehydrogenase gene duplication. (PMID: 9880675) Carr IM … Markham AF (Mammalian genome : official journal of the International Mammalian Genome Society 1998) 2 3 58
  2. Comparative genomics search for losses of long-established genes on the human lineage. (PMID: 18085818) Zhu J … Haussler D (PLoS computational biology 2007) 3 58
  3. Identification of genes related to Parkinson's disease using expressed sequence tags. (PMID: 17213182) Kim JM … Kim NS (DNA research : an international journal for rapid publication of reports on genes and genomes 2006) 3 58
  4. Identification and characterisation of a sequence related to human sorbitol dehydrogenase. (PMID: 9183016) Carr IM … Coletta PL (European journal of biochemistry 1997) 3 58
  5. Molecular genetic analysis of the human sorbitol dehydrogenase gene. (PMID: 8535074) Carr IM … Markham AF (Mammalian genome : official journal of the International Mammalian Genome Society 1995) 3

Products for SORD2P Gene

Sources for SORD2P Gene

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