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Aliases for SONP1 Gene

Aliases for SONP1 Gene

  • SON Pseudogene 1 2 3
  • SON DNA Binding Protein Pseudogene 3
  • Son-Pseudogene 3
  • AL356276.2 5

External Ids for SONP1 Gene

Previous GeneCards Identifiers for SONP1 Gene

  • GC01P155946

Summaries for SONP1 Gene

GeneCards Summary for SONP1 Gene

SONP1 (SON Pseudogene 1) is a Pseudogene.

Additional gene information for SONP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SONP1 Gene

Genomics for SONP1 Gene

GeneHancer (GH) Regulatory Elements for SONP1 Gene

Promoters and enhancers for SONP1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I157707 Enhancer 0.3 dbSUPER 550.8 +0.2 175 4.2 ZNF146 SONP1 FCRL3 VDAC1P9
GH01I157721 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +15.4 15438 6.4 NR2F1 ZBTB7B ATF2 RELA GABPA ZNF585B POLR2A IKZF1 NBN ZNF143 VDAC1P9 FCRL3 ENSG00000227217 FCRL2 FCRL1 SONP1
GH01I157703 Enhancer 0.3 dbSUPER 0.8 -4.4 -4422 1.6 SPI1 FCRL3 SONP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SONP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SONP1 Gene

Genomic Locations for SONP1 Gene
2,490 bases
Plus strand

Genomic View for SONP1 Gene

Genes around SONP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SONP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SONP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SONP1 Gene

Proteins for SONP1 Gene

Post-translational modifications for SONP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SONP1 Gene

Domains & Families for SONP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SONP1 Gene

Function for SONP1 Gene

Phenotypes From GWAS Catalog for SONP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SONP1 Gene

Localization for SONP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SONP1 Gene

Pathways & Interactions for SONP1 Gene

SuperPathways for SONP1 Gene

No Data Available

Interacting Proteins for SONP1 Gene

Gene Ontology (GO) - Biological Process for SONP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SONP1 Gene

Drugs & Compounds for SONP1 Gene

No Compound Related Data Available

Transcripts for SONP1 Gene

mRNA/cDNA for SONP1 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SONP1 Gene

No ASD Table

Relevant External Links for SONP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SONP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SONP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SONP1 Gene:

genes like me logo Genes that share expression patterns with SONP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SONP1 Gene

Orthologs for SONP1 Gene

Evolution for SONP1 Gene

Gene Tree for SONP1 (if available)
Gene Tree for SONP1 (if available)

No data available for Orthologs for SONP1 Gene

Paralogs for SONP1 Gene

No data available for Paralogs for SONP1 Gene

Variants for SONP1 Gene

Additional Variant Information for SONP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SONP1 Gene

Disorders for SONP1 Gene

Additional Disease Information for SONP1

Genetic Association Database

No disorders were found for SONP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SONP1 Gene

Publications for SONP1 Gene

  1. [son Pseudogenes do not contain five repeating elements of the region of complete tandem repeats present in the homologous sequence of the son gene]. (PMID: 8503959) Bliskovskiĭ VV … Chumankov IM (Molekuliarnaia biologiia 1993) 2 3 58
  2. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin EJ … Vasan RS (BMC medical genetics 2007) 44 58

Products for SONP1 Gene

Sources for SONP1 Gene

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