Aliases for SOD2P1 Gene

Aliases for SOD2P1 Gene

  • Superoxide Dismutase 2 Pseudogene 1 2 3 5
  • Superoxide Dismutase 2, Mitochondrial Pseudogene 1 2 3
  • SOD2P1 5

External Ids for SOD2P1 Gene

Previous GeneCards Identifiers for SOD2P1 Gene

  • GC01M103567

Summaries for SOD2P1 Gene

GeneCards Summary for SOD2P1 Gene

SOD2P1 (Superoxide Dismutase 2 Pseudogene 1) is a Pseudogene.

Additional gene information for SOD2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SOD2P1 Gene

Genomics for SOD2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SOD2P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J103101 Enhancer 0.2 Ensembl 250.7 -0.8 -794 0.2 lnc-AMY1B-4 SOD2P1 COL11A1 HSALNG0005615
GH01J103106 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 -7.8 -7780 5.4 ZNF654 POLR2A CTCF SIN3A RAD21 SMC3 REST TAF1 EGR1 MAFK COL11A1 SOD2P1 HSALNG0005615
GH01J103105 Enhancer 0.2 Ensembl 0.7 -4.1 -4094 0.4 COL11A1 SOD2P1 HSALNG0005615
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SOD2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SOD2P1 Gene

Latest Assembly
568 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
568 bases
Minus strand

(GRCh37/hg19 by Ensembl)
562 bases
Minus strand

Genomic View for SOD2P1 Gene

Genes around SOD2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOD2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOD2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOD2P1 Gene

Proteins for SOD2P1 Gene

Post-translational modifications for SOD2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOD2P1 Gene

Domains & Families for SOD2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SOD2P1 Gene

Function for SOD2P1 Gene

Phenotypes From GWAS Catalog for SOD2P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOD2P1 Gene

Localization for SOD2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SOD2P1 Gene

Pathways & Interactions for SOD2P1 Gene

PathCards logo

SuperPathways for SOD2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SOD2P1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SOD2P1 Gene

Drugs & Compounds for SOD2P1 Gene

No Compound Related Data Available

Transcripts for SOD2P1 Gene

mRNA/cDNA for SOD2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOD2P1 Gene

No ASD Table

Relevant External Links for SOD2P1 Gene

GeneLoc Exon Structure for

Expression for SOD2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SOD2P1 Gene

genes like me logo Genes that share expression patterns with SOD2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SOD2P1 Gene

Orthologs for SOD2P1 Gene

Evolution for SOD2P1 Gene

Gene Tree for SOD2P1 (if available)
Gene Tree for SOD2P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for SOD2P1

No data available for Orthologs for SOD2P1 Gene

Paralogs for SOD2P1 Gene

No data available for Paralogs for SOD2P1 Gene

Variants for SOD2P1 Gene

Additional Variant Information for SOD2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOD2P1 Gene

Disorders for SOD2P1 Gene

No disorders were found for SOD2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOD2P1 Gene

Publications for SOD2P1 Gene

No publications were found for SOD2P1 Gene.

No data available for Mastermind for SOD2P1 Gene

Products for SOD2P1 Gene

Sources for SOD2P1 Gene