Aliases for SOD1P1 Gene
Subcategory (RNA class) for SOD1P1 Gene
lncRNA
Aliases for SOD1P1 Gene
External Ids for SOD1P1 Gene
- HGNC: 45134
- Entrez Gene: 106479055
- Ensembl: ENSG00000219074
ORGUL Members for SOD1P1 Gene
Previous GeneCards Identifiers for SOD1P1 Gene
- GC06M053065
Summaries for SOD1P1 Gene
GeneCards Summary for SOD1P1 Gene
SOD1P1 (Superoxide Dismutase 1 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.
Additional gene information for SOD1P1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOD1P1 Gene
Genomics for SOD1P1 Gene
GeneHancer (GH) Regulatory Elements for SOD1P1 Gene
Promoters and enhancers for SOD1P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06I053192 | Enhancer | 1 | Ensembl ENCODE dbSUPER | 0.8 | +4.4 | 4360 | 0.4 | ZNF263 MAFG RAD21 ZNF316 MAFF PRDM10 HNF4A PRDM1 | ENSG00000218713 SOD1P1 RNU6-464P GC06M053154 | |
| GH06I053199 | Enhancer | 0.9 | ENCODE dbSUPER | 0.8 | -2.3 | -2259 | 0.2 | CBFB JUNB ELF1 DPF2 ATF2 IRF4 ZNF217 BCL11A TARDBP IKZF1 | SOD1P1 ENSG00000218713 | |
| GH06I053187 | Enhancer | 1.1 | Ensembl ENCODE dbSUPER | 0.4 | +8.8 | 8755 | 1.2 | ZNF384 RAD21 ZFHX2 ZNF316 EGR1 ETV6 MAFK EGR2 ZNF362 RNF2 | ENSG00000218713 SOD1P1 GC06M053154 RNU6-464P | |
| GH06I053171 | Enhancer | 1.4 | FANTOM5 ENCODE dbSUPER | 0.3 | +25.0 | 25048 | 0.3 | HDGF MLX ARID4B SIN3A ZNF2 IRF4 BRCA1 ZNF48 ZNF213 ARID2 | ENSG00000218713 GC06M053154 RNU6-464P SOD1P1 | |
| GH06I053200 | Enhancer | 0.5 | dbSUPER | 0.8 | -4.2 | -4232 | 0.9 | IKZF1 EBF1 IKZF2 RUNX3 | ENSG00000218713 LOC730101 SOD1P1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SOD1P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SOD1P1 Gene
Genomic Locations for SOD1P1 Gene
- chr6:53,196,720-53,197,159
- (GRCh38/hg38)
- Size:
- 440 bases
- Orientation:
- Minus strand
- chr6:53,061,518-53,061,957
- (GRCh37/hg19)
Genomic View for SOD1P1 Gene
Genes around SOD1P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p12.1 by Ensembl
- 6p12.1 by Entrez Gene
- 6p12.1 by HGNC
SOD1P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SOD1P1 Gene
Proteins for SOD1P1 Gene
Post-translational modifications for SOD1P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SOD1P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SOD1P1
- Origene Custom Protein Services for SOD1P1
- Search GeneTex for Proteins for SOD1P1
No data available for DME Specific Peptides for SOD1P1 Gene
Domains & Families for SOD1P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SOD1P1 Gene
Function for SOD1P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SOD1P1
-
- Search ViGene Biosciences for SOD1P1
CRISPR Products
- Browse CRISPR knockouts for SOD1P1
miRNA Products
- Search ViGene Biosciences for SOD1P1
Inhibitory RNA Products
- Search ViGene Biosciences for SOD1P1
Clone Products
- GenScript: Custom all cDNA clones Services for SOD1P1
- VectorBuilder custom plasmid, inducible vectors for SOD1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SOD1P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOD1P1 Gene
Localization for SOD1P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SOD1P1 Gene
Transcripts for SOD1P1 Gene
mRNA/cDNA for SOD1P1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for SOD1P1
miRNA Products
- Search ViGene Biosciences for SOD1P1
Inhibitory RNA Products
- Search ViGene Biosciences for SOD1P1
Clone Products
- GenScript: Custom all cDNA clones Services for SOD1P1
- VectorBuilder custom plasmid, inducible vectors for SOD1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SOD1P1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for SOD1P1 Gene
NURSA nuclear receptor signaling pathways regulating expression of SOD1P1 Gene:
SOD1P1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SOD1P1 Gene
Orthologs for SOD1P1 Gene
No data available for Orthologs for SOD1P1 Gene
Paralogs for SOD1P1 Gene
No data available for Paralogs for SOD1P1 Gene
Variants for SOD1P1 Gene
Additional Variant Information for SOD1P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SOD1P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOD1P1 Gene
Disorders for SOD1P1 Gene
No disorders were found for SOD1P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOD1P1 Gene
Publications for SOD1P1 Gene
No publications were found for SOD1P1 Gene.
Products for SOD1P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SOD1P1
- Origene Custom Protein Services for SOD1P1
- Browse OriGene Inhibitory RNA Products For SOD1P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SOD1P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SOD1P1
- GenScript: Custom all cDNA clones Services for SOD1P1
- GenScript Custom Purified and Recombinant Proteins Services for SOD1P1
- GenScript Custom Assay Services for SOD1P1
- GenScript Custom overexpressing Cell Line Services for SOD1P1
- Browse GenScript CRISPR for SOD1P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for SOD1P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse Sino Biological ELISA Kits
- Browse Sino Biological ELISA Pair Sets
- Browse Sino Biological CRO Services
- Browse Sino Biological Control Vectors
- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SOD1P1
- VectorBuilder custom plasmid, inducible vectors for SOD1P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SOD1P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SOD1P1
- Search GeneTex for Proteins for SOD1P1
Sources for SOD1P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew