Aliases for SNX6P1 Gene

Aliases for SNX6P1 Gene

  • Sorting Nexin 6 Pseudogene 1 2 3 5

External Ids for SNX6P1 Gene

Previous GeneCards Identifiers for SNX6P1 Gene

  • GC19M023309

Summaries for SNX6P1 Gene

GeneCards Summary for SNX6P1 Gene

SNX6P1 (Sorting Nexin 6 Pseudogene 1) is a Pseudogene.

Additional gene information for SNX6P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNX6P1 Gene

Genomics for SNX6P1 Gene

GeneHancer (GH) Regulatory Elements for SNX6P1 Gene

Promoters and enhancers for SNX6P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J023127 Enhancer 0.2 FANTOM5 500.7 -0.2 -187 0.4 SNX6P1 ENSG00000268105 LOC100419307 piR-54764-335 NONHSAG025339.2 ZNF730
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNX6P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNX6P1 Gene

Genomic Locations for SNX6P1 Gene
chr19:23,125,841-23,127,804
(GRCh38/hg38)
Size:
1,964 bases
Orientation:
Minus strand
chr19:23,308,643-23,310,602
(GRCh37/hg19)
Size:
1,960 bases
Orientation:
Minus strand

Genomic View for SNX6P1 Gene

Genes around SNX6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNX6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNX6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX6P1 Gene

Proteins for SNX6P1 Gene

Post-translational modifications for SNX6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX6P1 Gene

Domains & Families for SNX6P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNX6P1 Gene

Function for SNX6P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX6P1 Gene

Localization for SNX6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNX6P1 Gene

Pathways & Interactions for SNX6P1 Gene

PathCards logo

SuperPathways for SNX6P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNX6P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNX6P1 Gene

Drugs & Compounds for SNX6P1 Gene

No Compound Related Data Available

Transcripts for SNX6P1 Gene

mRNA/cDNA for SNX6P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNX6P1 Gene

No ASD Table

Relevant External Links for SNX6P1 Gene

GeneLoc Exon Structure for
SNX6P1

Expression for SNX6P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNX6P1 Gene

mRNA differential expression in normal tissues according to GTEx for SNX6P1 Gene

This gene is overexpressed in Testis (x7.5) and Cervix - Endocervix (x5.6).
genes like me logo Genes that share expression patterns with SNX6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX6P1 Gene

Orthologs for SNX6P1 Gene

Evolution for SNX6P1 Gene

ENSEMBL:
Gene Tree for SNX6P1 (if available)
TreeFam:
Gene Tree for SNX6P1 (if available)

No data available for Orthologs for SNX6P1 Gene

Paralogs for SNX6P1 Gene

No data available for Paralogs for SNX6P1 Gene

Variants for SNX6P1 Gene

Additional Variant Information for SNX6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNX6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNX6P1 Gene

Disorders for SNX6P1 Gene

No disorders were found for SNX6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNX6P1 Gene

Publications for SNX6P1 Gene

No publications were found for SNX6P1 Gene.

No data available for Mastermind for SNX6P1 Gene

Products for SNX6P1 Gene

Sources for SNX6P1 Gene