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Aliases for SNX2P2 Gene

Subcategory (RNA class) for SNX2P2 Gene

antisense

Aliases for SNX2P2 Gene

  • Sorting Nexin 2 Pseudogene 2 2 3 5

External Ids for SNX2P2 Gene

ORGUL Members for SNX2P2 Gene

Previous GeneCards Identifiers for SNX2P2 Gene

  • GC00U933792

Summaries for SNX2P2 Gene

GeneCards Summary for SNX2P2 Gene

SNX2P2 (Sorting Nexin 2 Pseudogene 2) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for SNX2P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNX2P2 Gene

Genomics for SNX2P2 Gene

GeneHancer (GH) Regulatory Elements for SNX2P2 Gene

Promoters and enhancers for SNX2P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I031942 Enhancer 0.2 dbSUPER 550.8 +1.0 1048 0.6 SNX2P2 PIR50396 PDE1C
GH07I031947 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +7.0 7049 2 ELF3 GATAD2A SMARCE1 FOXA2 TEAD1 FOXA3 SIN3A REST HMG20A ZNF644 SNX2P2 PIR50396 PDE1C
GH07I031958 Enhancer 0.6 ENCODE dbSUPER 0.4 +17.1 17143 0.2 FOSL2 FOS SNX2P2 PIR50396 PDE1C
GH07I031883 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.3 -57301 1.1 MAFK IKZF2 RFX5 SNX2P2 GC07M031722 PDE1C
GH07I031986 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.2 +46.1 46148 1.9 SP1 JUN REST FOSL2 FOS FOXA1 SNX2P2 PIR50396 PDE1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNX2P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNX2P2 Gene

Genomic Locations for SNX2P2 Gene
chr7:31,941,261-31,941,583
(GRCh38/hg38)
Size:
323 bases
Orientation:
Plus strand
chr7:31,980,874-31,981,196
(GRCh37/hg19)

Genomic View for SNX2P2 Gene

Genes around SNX2P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNX2P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNX2P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX2P2 Gene

Proteins for SNX2P2 Gene

Post-translational modifications for SNX2P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX2P2 Gene

Domains & Families for SNX2P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNX2P2 Gene

Function for SNX2P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX2P2 Gene

Localization for SNX2P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNX2P2 Gene

Pathways & Interactions for SNX2P2 Gene

SuperPathways for SNX2P2 Gene

No Data Available

Interacting Proteins for SNX2P2 Gene

Gene Ontology (GO) - Biological Process for SNX2P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNX2P2 Gene

Drugs & Compounds for SNX2P2 Gene

No Compound Related Data Available

Transcripts for SNX2P2 Gene

mRNA/cDNA for SNX2P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNX2P2 Gene

No ASD Table

Relevant External Links for SNX2P2 Gene

GeneLoc Exon Structure for
SNX2P2
ECgene alternative splicing isoforms for
SNX2P2

Expression for SNX2P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNX2P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNX2P2 Gene:

SNX2P2
genes like me logo Genes that share expression patterns with SNX2P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX2P2 Gene

Orthologs for SNX2P2 Gene

Evolution for SNX2P2 Gene

ENSEMBL:
Gene Tree for SNX2P2 (if available)
TreeFam:
Gene Tree for SNX2P2 (if available)

No data available for Orthologs for SNX2P2 Gene

Paralogs for SNX2P2 Gene

No data available for Paralogs for SNX2P2 Gene

Variants for SNX2P2 Gene

Additional Variant Information for SNX2P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNX2P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNX2P2 Gene

Disorders for SNX2P2 Gene

No disorders were found for SNX2P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNX2P2 Gene

Publications for SNX2P2 Gene

No publications were found for SNX2P2 Gene.

Products for SNX2P2 Gene

Sources for SNX2P2 Gene

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