Aliases for SNX2P1 Gene

Aliases for SNX2P1 Gene

  • Sorting Nexin 2 Pseudogene 1 2 3
  • Sorting Nexin 2 (SNX2) Pseudogene 5
  • AL445435.1 5

External Ids for SNX2P1 Gene

Previous GeneCards Identifiers for SNX2P1 Gene

  • GC01P220381

Summaries for SNX2P1 Gene

GeneCards Summary for SNX2P1 Gene

SNX2P1 (Sorting Nexin 2 Pseudogene 1) is a Pseudogene.

Additional gene information for SNX2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNX2P1 Gene

Genomics for SNX2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNX2P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J220270 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 23.4 +64.0 64018 3.7 RNF2 CREB1 TEAD4 PRDM10 ZNF629 TFE3 ZNF512 LEF1 IKZF1 ZNF692 RAB3GAP2 lnc-BPNT1-2 lnc-IARS2-5 RPS15AP12 SNX2P1 ZC3H11B BPNT1 AURKAP1 IARS2
GH01J220299 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 9.9 +93.3 93283 2.2 ATF7 PRDM10 ZNF629 ZNF512 RFX1 LEF1 IKZF1 ZNF692 JUND DDX20 RAB3GAP2 RPS15AP12 SNX2P1 C1orf115 XRCC6P3 lnc-IARS2-4 MARK1
GH01J219658 Enhancer 1.1 ENCODE CraniofacialAtlas 4.4 -547.3 -547255 2.9 CREB1 CTCF ATF7 PRDM10 ZNF629 IKZF1 KDM1A ZNF692 JUND FOXA1 SNX2P1 piR-57387-003 lnc-ZC3H11B-8 ZC3H11B SLC30A10
GH01J219710 Enhancer 0.8 Ensembl ENCODE 4.6 -496.4 -496418 1.6 RFX1 MTA2 ZNF24 FOXJ2 MGA JUND BMI1 NFRKB GTF2A2 ZNF589 SNX2P1 piR-38344-007 lnc-ZC3H11B-5 ZC3H11B LOC105372926 SLC30A10
GH01J219713 Enhancer 0.5 Ensembl 4.4 -493.4 -493417 1.2 ZNF512 SOX6 NFE2 ZNF316 MAFG MAFK ATF4 ATF2 EMSY SNX2P1 piR-38344-007 lnc-ZC3H11B-5 ZC3H11B LOC105372926 SLC30A10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNX2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNX2P1 Gene

Genomic Locations for SNX2P1 Gene
665 bases
Plus strand
665 bases
Plus strand

Genomic View for SNX2P1 Gene

Genes around SNX2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNX2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNX2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX2P1 Gene

Proteins for SNX2P1 Gene

Post-translational modifications for SNX2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX2P1 Gene

Domains & Families for SNX2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNX2P1 Gene

Function for SNX2P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX2P1 Gene

Localization for SNX2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNX2P1 Gene

Pathways & Interactions for SNX2P1 Gene

PathCards logo

SuperPathways for SNX2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNX2P1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNX2P1 Gene

Drugs & Compounds for SNX2P1 Gene

No Compound Related Data Available

Transcripts for SNX2P1 Gene

mRNA/cDNA for SNX2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNX2P1 Gene

No ASD Table

Relevant External Links for SNX2P1 Gene

GeneLoc Exon Structure for

Expression for SNX2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNX2P1 Gene

genes like me logo Genes that share expression patterns with SNX2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX2P1 Gene

Orthologs for SNX2P1 Gene

Evolution for SNX2P1 Gene

Gene Tree for SNX2P1 (if available)
Gene Tree for SNX2P1 (if available)

No data available for Orthologs for SNX2P1 Gene

Paralogs for SNX2P1 Gene

No data available for Paralogs for SNX2P1 Gene

Variants for SNX2P1 Gene

Additional Variant Information for SNX2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNX2P1 Gene

Disorders for SNX2P1 Gene

No disorders were found for SNX2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNX2P1 Gene

Publications for SNX2P1 Gene

No publications were found for SNX2P1 Gene.

No data available for Mastermind for SNX2P1 Gene

Products for SNX2P1 Gene

Sources for SNX2P1 Gene