Aliases for SNX29P2 Gene
Aliases for SNX29P2 Gene
External Ids for SNX29P2 Gene
- HGNC: 31914
- Entrez Gene: 440352
- Ensembl: ENSG00000271699
- UniProtKB: Q8IUI4
Previous HGNC Symbols for SNX29P2 Gene
- RUNDC2C
Previous GeneCards Identifiers for SNX29P2 Gene
- GC16P029304
Summaries for SNX29P2 Gene
GeneCards Summary for SNX29P2 Gene
SNX29P2 (Sorting Nexin 29 Pseudogene 2) is a Pseudogene.
Additional gene information for SNX29P2 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNX29P2 Gene
Genomics for SNX29P2 Gene
GeneHancer (GH) Regulatory Elements for SNX29P2 Gene
Promoters and enhancers for SNX29P2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around SNX29P2 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for SNX29P2 Gene
Genomic Locations for SNX29P2 Gene
- chr16:29,302,287-29,370,272
- (GRCh38/hg38)
- Size:
- 67,986 bases
- Orientation:
- Plus strand
- chr16:29,262,829-29,519,817
- (GRCh37/hg19)
Genomic View for SNX29P2 Gene
Genes around SNX29P2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16p11.2 by Ensembl
- 16p11.2 by Entrez Gene
- 16p11.2 by HGNC
SNX29P2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SNX29P2 Gene
Proteins for SNX29P2 Gene
-
Protein details for SNX29P2 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- Q8IUI4-S29P2_HUMAN
- Recommended name:
- Putative protein SNX29P2
- Protein Accession:
- Q8IUI4
Protein attributes for SNX29P2 Gene
- Size:
- 249 amino acids
- Molecular mass:
- 27226 Da
- Quaternary structure:
- No Data Available
Protein Expression for SNX29P2 Gene
Post-translational modifications for SNX29P2 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for SNX29P2
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNX29P2
- Origene Custom Protein Services for SNX29P2
- Search GeneTex for Proteins for SNX29P2
No data available for DME Specific Peptides for SNX29P2 Gene
Domains & Families for SNX29P2 Gene
Protein Domains for SNX29P2 Gene
- ProtoNet:
Graphical View of Domain Structure for InterPro Entry
Q8IUI4- Family:
-
- Belongs to the sorting nexin family.
No data available for Gene Families and Suggested Antigen Peptide Sequences for SNX29P2 Gene
Function for SNX29P2 Gene
Phenotypes From GWAS Catalog for SNX29P2 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for SNX29P2
-
- Search ViGene Biosciences for SNX29P2
CRISPR Products
- Browse CRISPR knockouts for SNX29P2
- Applied Biological Materials CRISPR for SNX29P2
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SNX29P2
Inhibitory RNA Products
- Search ViGene Biosciences for SNX29P2
Clone Products
- GenScript: Custom all cDNA clones Services for SNX29P2
- VectorBuilder custom plasmid, inducible vectors for SNX29P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNX29P2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SNX29P2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX29P2 Gene
Localization for SNX29P2 Gene
| Compartment | Confidence |
|---|---|
| nucleus | 2 |
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNX29P2 Gene
Transcripts for SNX29P2 Gene
mRNA/cDNA for SNX29P2 Gene
- (7) Additional mRNA sequences :
- (77) Selected AceView cDNA sequences:
- (4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for SNX29P2 Gene
CRISPR Products
- Browse CRISPR knockouts for SNX29P2
- Applied Biological Materials CRISPR for SNX29P2
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for SNX29P2
Inhibitory RNA Products
- Search ViGene Biosciences for SNX29P2
Clone Products
- GenScript: Custom all cDNA clones Services for SNX29P2
- VectorBuilder custom plasmid, inducible vectors for SNX29P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNX29P2
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for SNX29P2
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for SNX29P2 Gene
mRNA differential expression in normal tissues according to GTEx for SNX29P2 Gene
This gene is overexpressed in Liver (x5.7) and Ovary (x5.5).
This gene is overexpressed in Gallbladder (41.9) and Fetal heart (27.1).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SNX29P2 Gene
NURSA nuclear receptor signaling pathways regulating expression of SNX29P2 Gene:
SNX29P2SOURCE GeneReport for Unigene cluster for SNX29P2 Gene:
Hs.658149Primer Products
-
OriGene qPCR primer pairs for SNX29P2
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX29P2 Gene
Orthologs for SNX29P2 Gene
No data available for Orthologs for SNX29P2 Gene
Paralogs for SNX29P2 Gene
(2) SIMAP similar genes for SNX29P2 Gene using alignment to 1 proteins:
No data available for Paralogs for SNX29P2 Gene
Variants for SNX29P2 Gene
| SNP ID | Clin | Chr 16 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000054012 | -- | 29,308,006(+) | C/A/T | intron_variant | |
| rs1000204522 | -- | 29,312,851(+) | T/C | intron_variant | |
| rs1000241030 | -- | 29,321,229(+) | T/G | intron_variant | |
| rs1000248249 | -- | 29,336,587(+) | C/T | intron_variant | |
| rs1000355631 | -- | 29,353,648(+) | C/G | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2669019 | CNV | deletion | 23128226 |
| esv2758641 | CNV | gain | 17122850 |
| esv3638360 | CNV | gain | 21293372 |
| nsv1779 | CNV | deletion | 18451855 |
| nsv952965 | CNV | deletion | 24416366 |
| nsv977949 | CNV | duplication | 23825009 |
| nsv977950 | CNV | duplication | 23825009 |
| nsv977951 | CNV | duplication | 23825009 |
| nsv984306 | CNV | duplication | 23825009 |
Additional Variant Information for SNX29P2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SNX29P2
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNX29P2 Gene
Disorders for SNX29P2 Gene
Additional Disease Information for SNX29P2
No disorders were found for SNX29P2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNX29P2 Gene
Publications for SNX29P2 Gene
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
- The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 4 58
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58
Products for SNX29P2 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Human Proteins and Enzymes
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
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- Browse OriGene Antibodies
- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNX29P2
- Origene Custom Protein Services for SNX29P2
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- OriGene qPCR primer pairs for SNX29P2
- Browse CRISPR knockouts for SNX29P2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SNX29P2
- GenScript: Custom all cDNA clones Services for SNX29P2
- GenScript Custom Purified and Recombinant Proteins Services for SNX29P2
- GenScript Custom Assay Services for SNX29P2
- GenScript Custom overexpressing Cell Line Services for SNX29P2
- Browse GenScript CRISPR for SNX29P2
- Design optimal peptide antigens
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- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
- Sino Biological Anti-His Tag Antibody
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for SNX29P2
- VectorBuilder custom plasmid, inducible vectors for SNX29P2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for SNX29P2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for SNX29P2
- Search GeneTex for Proteins for SNX29P2
- Search ViGene Biosciences for SNX29P2
Sources for SNX29P2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems