Aliases for SNRPGP5 Gene

Aliases for SNRPGP5 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 5 2 3 5

External Ids for SNRPGP5 Gene

Previous GeneCards Identifiers for SNRPGP5 Gene

  • GC00U931400
  • GC10M013147

Summaries for SNRPGP5 Gene

GeneCards Summary for SNRPGP5 Gene

SNRPGP5 (Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 5) is a Pseudogene.

Additional gene information for SNRPGP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPGP5 Gene

Genomics for SNRPGP5 Gene

GeneHancer (GH) Regulatory Elements for SNRPGP5 Gene

Promoters and enhancers for SNRPGP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J013098 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.7 +3.8 3755 4.5 HNRNPK EP300 CTCF SIN3A PHF8 TEAD4 ZNF639 ZBTB26 SAP30 ZNF740 CCDC3 OPTN lnc-CCDC3-1 ENSG00000239665 SNRPGP5 lnc-CCDC3-2
GH10J013104 Enhancer 0.9 ENCODE 0.7 -2.9 -2857 5.4 FOXK2 USF1 KDM6A TCF7 FOXA1 TOE1 SKI TEAD1 ATF2 ZBTB26 SNRPGP5 lnc-CCDC3-2 OPTN ENSG00000234175 lnc-CCDC3-3
GH10J013117 Promoter/Enhancer 0.9 Ensembl ENCODE 0.4 -13.1 -13062 0.5 MEF2C BCL11A MEF2B SPI1 BATF ELF1 IKZF1 JUNB TCF7 MEF2A OPTN lnc-CCDC3-2 SNRPGP5 ENSG00000234175 lnc-CCDC3-3
GH10J013115 Enhancer 0.7 ENCODE 0.4 -11.6 -11598 1.5 CTBP1 NFYB NR2F2 NCOR1 NR2C1 IRF1 NR2F1 TAL1 FOXK2 DPF2 OPTN lnc-CCDC3-2 SNRPGP5 ENSG00000234175 lnc-CCDC3-3
GH10J013118 Enhancer 0.6 ENCODE 0.4 -13.5 -13493 0.2 MEF2C BCL11A MEF2B BATF ELF1 IKZF1 SMAD5 JUNB TCF7 SPI1 OPTN lnc-CCDC3-2 SNRPGP5 ENSG00000234175 lnc-CCDC3-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPGP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPGP5 Gene

Genomic Locations for SNRPGP5 Gene
chr10:13,104,574-13,104,793
(GRCh38/hg38)
Size:
220 bases
Orientation:
Minus strand
chr10:13,146,574-13,146,793
(GRCh37/hg19)
Size:
220 bases
Orientation:
Minus strand

Genomic View for SNRPGP5 Gene

Genes around SNRPGP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPGP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPGP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPGP5 Gene

Proteins for SNRPGP5 Gene

Post-translational modifications for SNRPGP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPGP5 Gene

Domains & Families for SNRPGP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPGP5 Gene

Function for SNRPGP5 Gene

Phenotypes From GWAS Catalog for SNRPGP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPGP5 Gene

Localization for SNRPGP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPGP5 Gene

Pathways & Interactions for SNRPGP5 Gene

PathCards logo

SuperPathways for SNRPGP5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNRPGP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPGP5 Gene

Drugs & Compounds for SNRPGP5 Gene

No Compound Related Data Available

Transcripts for SNRPGP5 Gene

mRNA/cDNA for SNRPGP5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPGP5 Gene

No ASD Table

Relevant External Links for SNRPGP5 Gene

GeneLoc Exon Structure for
SNRPGP5

Expression for SNRPGP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPGP5 Gene

genes like me logo Genes that share expression patterns with SNRPGP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPGP5 Gene

Orthologs for SNRPGP5 Gene

Evolution for SNRPGP5 Gene

ENSEMBL:
Gene Tree for SNRPGP5 (if available)
TreeFam:
Gene Tree for SNRPGP5 (if available)

No data available for Orthologs for SNRPGP5 Gene

Paralogs for SNRPGP5 Gene

No data available for Paralogs for SNRPGP5 Gene

Variants for SNRPGP5 Gene

Additional Variant Information for SNRPGP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPGP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPGP5 Gene

Disorders for SNRPGP5 Gene

No disorders were found for SNRPGP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPGP5 Gene

Publications for SNRPGP5 Gene

No publications were found for SNRPGP5 Gene.

No data available for Mastermind for SNRPGP5 Gene

Products for SNRPGP5 Gene

Sources for SNRPGP5 Gene