Aliases for SNRPGP18 Gene

Aliases for SNRPGP18 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 18 2 3 5

External Ids for SNRPGP18 Gene

Previous GeneCards Identifiers for SNRPGP18 Gene

  • GC00U935408

Summaries for SNRPGP18 Gene

GeneCards Summary for SNRPGP18 Gene

SNRPGP18 (Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 18) is a Pseudogene.

Additional gene information for SNRPGP18 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPGP18 Gene

Genomics for SNRPGP18 Gene

GeneHancer (GH) Regulatory Elements for SNRPGP18 Gene

Promoters and enhancers for SNRPGP18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J116157 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.8 -6844 11.6 ZBTB40 ZNF362 HLF ZNF121 TEAD4 SP1 ZNF384 MAFK CBFA2T2 SP7 MED13L SNRPGP18 lnc-MAP1LC3B2-10 MIR620 lnc-C12orf49-6
GH12J116171 Enhancer 0.9 ENCODE dbSUPER 0.6 +3.3 3298 1.4 SMARCE1 ZNF362 ETV6 TEAD4 PRDM1 CREM ZBED1 PKNOX1 HDAC1 EP300 MIR620 SNRPGP18 lnc-MAP1LC3B2-10 ENSG00000258337 lnc-C12orf49-6 MED13L
GH12J116151 Enhancer 0.7 ENCODE dbSUPER 0.4 -16.6 -16564 2 RELA MAFK PRDM1 SP1 RUNX3 EBF1 FEZF1 PRDM6 MIR620 SNRPGP18 lnc-MAP1LC3B2-10 lnc-C12orf49-6 MED13L
GH12J116149 Promoter/Enhancer 0.6 Ensembl dbSUPER 0.4 -17.8 -17844 0.4 PRDM6 MIR620 SNRPGP18 lnc-MAP1LC3B2-10 MED13L lnc-C12orf49-6
GH12J116153 Enhancer 0.5 ENCODE dbSUPER 0.4 -15.0 -14983 0.7 ZSCAN5C ZNF664 MIR620 lnc-MAP1LC3B2-10 SNRPGP18 lnc-C12orf49-6 MED13L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPGP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPGP18 Gene

Genomic Locations for SNRPGP18 Gene
chr12:116,169,045-116,169,258
(GRCh38/hg38)
Size:
214 bases
Orientation:
Plus strand

Genomic View for SNRPGP18 Gene

Genes around SNRPGP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPGP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPGP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPGP18 Gene

Proteins for SNRPGP18 Gene

Post-translational modifications for SNRPGP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPGP18 Gene

Domains & Families for SNRPGP18 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPGP18 Gene

Function for SNRPGP18 Gene

Phenotypes From GWAS Catalog for SNRPGP18 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPGP18 Gene

Localization for SNRPGP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPGP18 Gene

Pathways & Interactions for SNRPGP18 Gene

PathCards logo

SuperPathways for SNRPGP18 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPGP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPGP18 Gene

Drugs & Compounds for SNRPGP18 Gene

No Compound Related Data Available

Transcripts for SNRPGP18 Gene

mRNA/cDNA for SNRPGP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPGP18 Gene

No ASD Table

Relevant External Links for SNRPGP18 Gene

GeneLoc Exon Structure for
SNRPGP18
ECgene alternative splicing isoforms for
SNRPGP18

Expression for SNRPGP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPGP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPGP18 Gene:

SNRPGP18
genes like me logo Genes that share expression patterns with SNRPGP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPGP18 Gene

Orthologs for SNRPGP18 Gene

Evolution for SNRPGP18 Gene

ENSEMBL:
Gene Tree for SNRPGP18 (if available)
TreeFam:
Gene Tree for SNRPGP18 (if available)

No data available for Orthologs for SNRPGP18 Gene

Paralogs for SNRPGP18 Gene

No data available for Paralogs for SNRPGP18 Gene

Variants for SNRPGP18 Gene

Additional Variant Information for SNRPGP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPGP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPGP18 Gene

Disorders for SNRPGP18 Gene

No disorders were found for SNRPGP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPGP18 Gene

Publications for SNRPGP18 Gene

No publications were found for SNRPGP18 Gene.

No data available for External Links for SNRPGP18 Gene

Products for SNRPGP18 Gene

Sources for SNRPGP18 Gene