Free for academic non-profit institutions. Other users need a Commercial license

SNRPGP17 Gene(Pseudogene)

Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 17

GCID:
GC17P059281
GIFtS:
10
Genes Participants
UDN Logo

Aliases for SNRPGP17 Gene

Subcategory (RNA class) for SNRPGP17 Gene

lncRNA

Aliases for SNRPGP17 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 17 2 3 5

External Ids for SNRPGP17 Gene

ORGUL Members for SNRPGP17 Gene

Previous GeneCards Identifiers for SNRPGP17 Gene

  • GC00U935054

Summaries for SNRPGP17 Gene

GeneCards Summary for SNRPGP17 Gene

SNRPGP17 (Small Nuclear Ribonucleoprotein Polypeptide G Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SNRPGP17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPGP17 Gene

Genomics for SNRPGP17 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for SNRPGP17 Gene

Promoters and enhancers for SNRPGP17 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17I059276 Enhancer 0.8 Ensembl ENCODE 0.8 -3.9 -3862 1.3 NCOA3 PKNOX1 ZNF687 ATF2 ZNF592 NFIC FOXK2 NBN ATF7 ZNF24 YPEL2 SMG8 SNRPGP17 ENSG00000207235
GH17I059327 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.2 +49.4 49429 6 PKNOX1 CLOCK FOXA2 ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF207 ZNF143 YPEL2 RNFT1 NDUFB8P2 RPS6KB1 TUBD1 HEATR6 TEX14 SKA2 SNRPGP17
GH17I059286 Enhancer 1.3 Ensembl ENCODE 0.4 +8.4 8372 5.3 PKNOX1 FOXA2 ARNT YBX1 FEZF1 DMAP1 ZNF2 ZBTB7B ZNF766 ZNF213 HEATR6 TUBD1 RPS6KB1 DHX40 RAD51C SEPT4 SNRPGP17 YPEL2
GH17I059295 Enhancer 0.9 ENCODE 0.4 +15.9 15877 2.3 PKNOX1 FOXA2 ARID4B SIN3A GTF3C2 FOS RXRA REST PPARG KAT8 TEX14 ENSG00000265415 SNRPGP17 YPEL2
GH17I059311 Enhancer 0.8 ENCODE 0.3 +30.0 30015 0.2 RAD21 RFX5 ZNF213 ARID2 ZNF143 MIXL1 SMARCA5 ZNF654 NCOA1 REST YPEL2 SNRPGP17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNRPGP17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPGP17 Gene

Genomic Locations for SNRPGP17 Gene
chr17:59,281,130-59,281,343
(GRCh38/hg38)
Size:
214 bases
Orientation:
Plus strand

Genomic View for SNRPGP17 Gene

Genes around SNRPGP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPGP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPGP17 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SNRPGP17 Gene

Proteins for SNRPGP17 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SNRPGP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPGP17 Gene

Domains & Families for SNRPGP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNRPGP17 Gene

Function for SNRPGP17 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPGP17 Gene

Localization for SNRPGP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPGP17 Gene

Pathways & Interactions for SNRPGP17 Gene

SuperPathways for SNRPGP17 Gene

PathCards logo More details on SuperPathways for SNRPGP17
No Data Available

Interacting Proteins for SNRPGP17 Gene

Gene Ontology (GO) - Biological Process for SNRPGP17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPGP17 Gene

Drugs & Compounds for SNRPGP17 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SNRPGP17 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SNRPGP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPGP17 Gene

No ASD Table

Relevant External Links for SNRPGP17 Gene

GeneLoc Exon Structure for
SNRPGP17
ECgene alternative splicing isoforms for
SNRPGP17

Expression for SNRPGP17 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPGP17 Gene

mRNA expression in normal human tissues for SNRPGP17 Gene
mRNA expression by GTEx for SNRPGP17 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPGP17 Gene:

SNRPGP17
genes like me logo Genes that share expression patterns with SNRPGP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPGP17 Gene

Orthologs for SNRPGP17 Gene

Evolution for SNRPGP17 Gene

ENSEMBL:
Gene Tree for SNRPGP17 (if available)
TreeFam:
Gene Tree for SNRPGP17 (if available)

No data available for Orthologs for SNRPGP17 Gene

Paralogs for SNRPGP17 Gene

No data available for Paralogs for SNRPGP17 Gene

Variants for SNRPGP17 Gene

Additional Variant Information for SNRPGP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPGP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPGP17 Gene

Disorders for SNRPGP17 Gene

No disorders were found for SNRPGP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPGP17 Gene

Publications for SNRPGP17 Gene

No publications were found for SNRPGP17 Gene.

Products for SNRPGP17 Gene

Sources for SNRPGP17 Gene

Content
Loading form....