Aliases for SNRPFP2 Gene

Aliases for SNRPFP2 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide F Pseudogene 2 2 3 5
  • SNRPFP2 5

External Ids for SNRPFP2 Gene

Previous GeneCards Identifiers for SNRPFP2 Gene

  • GC00U932267
  • GC01P026217

Summaries for SNRPFP2 Gene

GeneCards Summary for SNRPFP2 Gene

SNRPFP2 (Small Nuclear Ribonucleoprotein Polypeptide F Pseudogene 2) is a Pseudogene.

Additional gene information for SNRPFP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPFP2 Gene

Genomics for SNRPFP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPFP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J025885 Enhancer 0.6 ENCODE dbSUPER 600.7 -1.1 -1115 2.3 GATAD2A SMAD4 BCL6 SNRPFP2 lnc-MTFR1L-2 MTFR1L ENSG00000252190 ENSG00000252691 RNU6-110P EXTL1 SLC30A2 SELENON TRIM63
GH01J025879 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -7.4 -7354 2.3 IKZF1 CTBP1 NR3C1 MYC ZNF189 DPF2 RAD21 ZFP91 MCM2 HNF4A MTFR1L ARID1A EXTL1 RNU6-110P SLC30A2 SELENON TRIM63 ENSG00000207302 PAQR7 SNRPFP2
GH01J025881 Enhancer 0.2 Ensembl 0.4 -6.0 -6029 0.2 EXTL1 RNU6-110P SLC30A2 SELENON TRIM63 ENSG00000207302 PAQR7 SNRPFP2 STMN1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPFP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPFP2 Gene

Genomic Locations for SNRPFP2 Gene
chr1:25,887,330-25,887,702
(GRCh38/hg38)
Size:
373 bases
Orientation:
Plus strand
chr1:26,213,851-26,214,101
(GRCh37/hg19)
Size:
251 bases
Orientation:
Plus strand

Genomic View for SNRPFP2 Gene

Genes around SNRPFP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPFP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPFP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPFP2 Gene

Proteins for SNRPFP2 Gene

Post-translational modifications for SNRPFP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPFP2 Gene

Domains & Families for SNRPFP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPFP2 Gene

Function for SNRPFP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPFP2 Gene

Localization for SNRPFP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPFP2 Gene

Pathways & Interactions for SNRPFP2 Gene

PathCards logo

SuperPathways for SNRPFP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPFP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPFP2 Gene

Drugs & Compounds for SNRPFP2 Gene

No Compound Related Data Available

Transcripts for SNRPFP2 Gene

mRNA/cDNA for SNRPFP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPFP2 Gene

No ASD Table

Relevant External Links for SNRPFP2 Gene

GeneLoc Exon Structure for
SNRPFP2

Expression for SNRPFP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPFP2 Gene

mRNA differential expression in normal tissues according to GTEx for SNRPFP2 Gene

This gene is overexpressed in Testis (x15.5), Brain - Cerebellum (x5.1), and Brain - Cerebellar Hemisphere (x4.2).
genes like me logo Genes that share expression patterns with SNRPFP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPFP2 Gene

Orthologs for SNRPFP2 Gene

Evolution for SNRPFP2 Gene

ENSEMBL:
Gene Tree for SNRPFP2 (if available)
TreeFam:
Gene Tree for SNRPFP2 (if available)

No data available for Orthologs for SNRPFP2 Gene

Paralogs for SNRPFP2 Gene

No data available for Paralogs for SNRPFP2 Gene

Variants for SNRPFP2 Gene

Additional Variant Information for SNRPFP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPFP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPFP2 Gene

Disorders for SNRPFP2 Gene

No disorders were found for SNRPFP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPFP2 Gene

Publications for SNRPFP2 Gene

No publications were found for SNRPFP2 Gene.

No data available for Mastermind for SNRPFP2 Gene

Products for SNRPFP2 Gene

Sources for SNRPFP2 Gene