Aliases for SNRPEP9 Gene

Aliases for SNRPEP9 Gene

  • SNRPE Pseudogene 9 2 3 5
  • Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 9 2 3
  • SNRPEP9 5

External Ids for SNRPEP9 Gene

Summaries for SNRPEP9 Gene

GeneCards Summary for SNRPEP9 Gene

SNRPEP9 (SNRPE Pseudogene 9) is a Pseudogene.

Additional gene information for SNRPEP9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPEP9 Gene

Genomics for SNRPEP9 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPEP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ024498 Enhancer 0.7 Ensembl ENCODE 0.4 -14.8 -14830 0.8 CTCF PRDM6 RAD21 ZNF561 ARID3A ZEB2 SMC3 HSALNG0137060 SNRPEP9 PDK3 PCYT1B
GH0XJ024499 Enhancer 0.5 ENCODE 0.4 -14.2 -14228 0.2 ZNF654 CTCF RAD21 SMC3 PRDM6 ZNF561 ARID3A ZEB2 HSALNG0137060 SNRPEP9 PDK3 PCYT1B
GH0XJ024506 Enhancer 0.5 Ensembl 0.4 -7.1 -7106 0.6 FOXA1 NR2F1 ZNF687 FOS RUNX3 SNRPEP9 HSALNG0137060 PDK3 PCYT1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPEP9 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPEP9 Gene

Latest Assembly
chrX:24,513,407-24,513,687
(GRCh38/hg38)
Size:
281 bases
Orientation:
Plus strand

Previous Assembly
chrX:24,531,524-24,531,799
(GRCh37/hg19 by Entrez Gene)
Size:
276 bases
Orientation:
Plus strand

chrX:24,531,567-24,531,804
(GRCh37/hg19 by Ensembl)
Size:
238 bases
Orientation:
Plus strand

Genomic View for SNRPEP9 Gene

Genes around SNRPEP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPEP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPEP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPEP9 Gene

Proteins for SNRPEP9 Gene

Post-translational modifications for SNRPEP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPEP9 Gene

Domains & Families for SNRPEP9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPEP9 Gene

Function for SNRPEP9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP9 Gene

Localization for SNRPEP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPEP9 Gene

Pathways & Interactions for SNRPEP9 Gene

PathCards logo

SuperPathways for SNRPEP9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPEP9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPEP9 Gene

Drugs & Compounds for SNRPEP9 Gene

No Compound Related Data Available

Transcripts for SNRPEP9 Gene

mRNA/cDNA for SNRPEP9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPEP9 Gene

No ASD Table

Relevant External Links for SNRPEP9 Gene

GeneLoc Exon Structure for
SNRPEP9

Expression for SNRPEP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPEP9 Gene

genes like me logo Genes that share expression patterns with SNRPEP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPEP9 Gene

Orthologs for SNRPEP9 Gene

Evolution for SNRPEP9 Gene

ENSEMBL:
Gene Tree for SNRPEP9 (if available)
TreeFam:
Gene Tree for SNRPEP9 (if available)
Alliance of Genome Resources:
Additional Orthologs for SNRPEP9

No data available for Orthologs for SNRPEP9 Gene

Paralogs for SNRPEP9 Gene

No data available for Paralogs for SNRPEP9 Gene

Variants for SNRPEP9 Gene

Additional Variant Information for SNRPEP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPEP9
Leiden Open Variation Database (LOVD)
SNRPEP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP9 Gene

Disorders for SNRPEP9 Gene

No disorders were found for SNRPEP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP9 Gene

Publications for SNRPEP9 Gene

No publications were found for SNRPEP9 Gene.

No data available for Mastermind for SNRPEP9 Gene

Products for SNRPEP9 Gene

Sources for SNRPEP9 Gene