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Aliases for SNRPEP6 Gene

Aliases for SNRPEP6 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 6 2 3 5

External Ids for SNRPEP6 Gene

Previous GeneCards Identifiers for SNRPEP6 Gene

  • GC06M148889

Summaries for SNRPEP6 Gene

GeneCards Summary for SNRPEP6 Gene

SNRPEP6 (Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 6) is a Pseudogene.

Additional gene information for SNRPEP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPEP6 Gene

Genomics for SNRPEP6 Gene

GeneHancer (GH) Regulatory Elements for SNRPEP6 Gene

Promoters and enhancers for SNRPEP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J148565 Enhancer 1.1 Ensembl ENCODE dbSUPER 650.7 +1.5 1472 2.1 PKNOX1 JUN MAX BATF RELA ZNF366 EGR1 ETV6 FOS IKZF2 SNRPEP6 GC06M148568 UST-AS1 GC06M148489
GH06J148578 Enhancer 1 Ensembl ENCODE 0.4 -10.7 -10689 0.4 ELF3 PKNOX1 ARID4B ZNF2 ZNF48 RAD21 RFX5 ZNF614 ARID2 ZNF143 PPIL4 GINM1 TAB2 SNRPEP6 GC06M148648
GH06J148611 Enhancer 0.7 Ensembl ENCODE 0.3 -43.8 -43757 0.6 ZFHX2 PKNOX1 EGR1 GFI1B CEBPB FEZF1 FOS GC06M148648 SNRPEP6
GH06J148598 Enhancer 0.6 ENCODE 0.3 -31.8 -31824 3 FOXA2 NANOG ZNF792 FOXA3 NFYC ZNF644 SP1 CBX8 GATA3 POLR2A UST-AS1 UST SNRPEP6 GC06M148648
GH06J148592 Enhancer 0.4 ENCODE 0.3 -25.5 -25519 1.8 SP1 RXRA NR2F2 UST-AS1 UST SNRPEP6 GC06M148648
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPEP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPEP6 Gene

Genomic Locations for SNRPEP6 Gene
chr6:148,567,227-148,567,727
(GRCh38/hg38)
Size:
501 bases
Orientation:
Minus strand
chr6:148,888,514-148,888,790
(GRCh37/hg19)
Size:
277 bases
Orientation:
Minus strand

Genomic View for SNRPEP6 Gene

Genes around SNRPEP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPEP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPEP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPEP6 Gene

Function for SNRPEP6 Gene

Phenotypes From GWAS Catalog for SNRPEP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP6 Gene

Localization for SNRPEP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPEP6 Gene

Pathways & Interactions for SNRPEP6 Gene

SuperPathways for SNRPEP6 Gene

No Data Available

Interacting Proteins for SNRPEP6 Gene

Gene Ontology (GO) - Biological Process for SNRPEP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPEP6 Gene

Drugs & Compounds for SNRPEP6 Gene

No Compound Related Data Available

Transcripts for SNRPEP6 Gene

mRNA/cDNA for SNRPEP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPEP6 Gene

No ASD Table

Relevant External Links for SNRPEP6 Gene

GeneLoc Exon Structure for
SNRPEP6
ECgene alternative splicing isoforms for
SNRPEP6

Expression for SNRPEP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPEP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPEP6 Gene:

SNRPEP6
genes like me logo Genes that share expression patterns with SNRPEP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPEP6 Gene

Orthologs for SNRPEP6 Gene

Evolution for SNRPEP6 Gene

ENSEMBL:
Gene Tree for SNRPEP6 (if available)
TreeFam:
Gene Tree for SNRPEP6 (if available)

No data available for Orthologs for SNRPEP6 Gene

Paralogs for SNRPEP6 Gene

No data available for Paralogs for SNRPEP6 Gene

Variants for SNRPEP6 Gene

Additional Variant Information for SNRPEP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPEP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP6 Gene

Disorders for SNRPEP6 Gene

No disorders were found for SNRPEP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP6 Gene

Publications for SNRPEP6 Gene

No publications were found for SNRPEP6 Gene.

Products for SNRPEP6 Gene

Sources for SNRPEP6 Gene

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