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Aliases for SNRPEP4 Gene

Aliases for SNRPEP4 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 4 2 3 5

External Ids for SNRPEP4 Gene

Summaries for SNRPEP4 Gene

GeneCards Summary for SNRPEP4 Gene

SNRPEP4 (Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 4) is a Pseudogene.

Additional gene information for SNRPEP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPEP4 Gene

Genomics for SNRPEP4 Gene

GeneHancer (GH) Regulatory Elements for SNRPEP4 Gene

Promoters and enhancers for SNRPEP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I005577 Enhancer 1 Ensembl ENCODE 550.8 -1.1 -1121 1.2 PKNOX1 CLOCK FOXA2 RB1 ARID4B KLF17 SIN3A ZNF2 ZNF48 ZSCAN9 GC19M005580 SNRPEP4 RPL36 DUS3L RANBP3 LONP1 GC19P005571 GC19P005619
GH19I005689 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 112.6 -115.2 -115151 5 ZFP64 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 ZC3H11A RPL36 DUS3L KHSRP ENSG00000267571 SAFB SNRPEP4 VMAC SAFB2 PTPRS KDM4B
GH19I006527 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 79.1 -953.7 -953693 6.2 YBX1 IRF4 E2F8 ZNF143 ZNF548 MCM3 SP3 MEF2D ZNF610 GLIS1 TNFSF9 ZNF557 KHSRP DUS3L SAFB2 SAFB SNRPEP4 ENSG00000267571 GTF2F1 RANBP3
GH19I006270 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 46.2 -698.4 -698401 10.7 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 MLLT1 DUS3L ZNF557 KHSRP SNRPEP4 SAFB ENSG00000267571 VMAC GPR108 RANBP3
GH19I004721 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 37.1 +852.8 852848 4.5 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 NFYC ZFP41 DPP9 GC19P004749 GC19M004737 LOC105372250 TRG-TCC1-1 TRV-CAC3-1 PTPRS SAFB2 SAFB SNRPEP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNRPEP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPEP4 Gene

Genomic Locations for SNRPEP4 Gene
chr19:5,576,486-5,576,951
(GRCh38/hg38)
Size:
466 bases
Orientation:
Minus strand
chr19:5,576,493-5,576,962
(GRCh37/hg19)

Genomic View for SNRPEP4 Gene

Genes around SNRPEP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPEP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPEP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPEP4 Gene

Proteins for SNRPEP4 Gene

Post-translational modifications for SNRPEP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPEP4 Gene

Domains & Families for SNRPEP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNRPEP4 Gene

Function for SNRPEP4 Gene

Phenotypes From GWAS Catalog for SNRPEP4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP4 Gene

Localization for SNRPEP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPEP4 Gene

Pathways & Interactions for SNRPEP4 Gene

SuperPathways for SNRPEP4 Gene

No Data Available

Interacting Proteins for SNRPEP4 Gene

Gene Ontology (GO) - Biological Process for SNRPEP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPEP4 Gene

Drugs & Compounds for SNRPEP4 Gene

No Compound Related Data Available

Transcripts for SNRPEP4 Gene

mRNA/cDNA for SNRPEP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPEP4 Gene

No ASD Table

Relevant External Links for SNRPEP4 Gene

GeneLoc Exon Structure for
SNRPEP4
ECgene alternative splicing isoforms for
SNRPEP4

Expression for SNRPEP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPEP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPEP4 Gene:

SNRPEP4
genes like me logo Genes that share expression patterns with SNRPEP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPEP4 Gene

Orthologs for SNRPEP4 Gene

Evolution for SNRPEP4 Gene

ENSEMBL:
Gene Tree for SNRPEP4 (if available)
TreeFam:
Gene Tree for SNRPEP4 (if available)

No data available for Orthologs for SNRPEP4 Gene

Paralogs for SNRPEP4 Gene

No data available for Paralogs for SNRPEP4 Gene

Variants for SNRPEP4 Gene

Additional Variant Information for SNRPEP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPEP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP4 Gene

Disorders for SNRPEP4 Gene

No disorders were found for SNRPEP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP4 Gene

Publications for SNRPEP4 Gene

No publications were found for SNRPEP4 Gene.

Products for SNRPEP4 Gene

Sources for SNRPEP4 Gene

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