Aliases for SNRPEP2 Gene

Aliases for SNRPEP2 Gene

  • SNRPE Pseudogene 2 2 3
  • Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 2 2 3 5
  • Small Nuclear Ribonucleoprotein Polypeptide E-Like 1 2 3
  • BA390F4.4 2 3
  • SNRPEL1 3
  • SNRPEP2 5

External Ids for SNRPEP2 Gene

Previous HGNC Symbols for SNRPEP2 Gene

  • SNRPEL1

Previous GeneCards Identifiers for SNRPEP2 Gene

  • GC09M006750

Summaries for SNRPEP2 Gene

GeneCards Summary for SNRPEP2 Gene

SNRPEP2 (SNRPE Pseudogene 2) is a Pseudogene.

Additional gene information for SNRPEP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPEP2 Gene

Genomics for SNRPEP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPEP2 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPEP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPEP2 Gene

Genomic Locations for SNRPEP2 Gene
chr9:6,748,553-6,749,014
(GRCh38/hg38)
Size:
462 bases
Orientation:
Minus strand
chr9:6,748,553-6,749,012
(GRCh37/hg19)
Size:
460 bases
Orientation:
Minus strand

Genomic View for SNRPEP2 Gene

Genes around SNRPEP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPEP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPEP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPEP2 Gene

Proteins for SNRPEP2 Gene

Post-translational modifications for SNRPEP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPEP2 Gene

Domains & Families for SNRPEP2 Gene

Suggested Antigen Peptide Sequences for SNRPEP2 Gene

GenScript: Design optimal peptide antigens:
  • Putative small nuclear ribonucleoprotein polypeptide E-like protein 1 (RUEL1_HUMAN)

No data available for Gene Families , Protein Domains , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPEP2 Gene

Function for SNRPEP2 Gene

Phenotypes for SNRPEP2 Gene

genes like me logo Genes that share phenotypes with SNRPEP2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP2 Gene

Localization for SNRPEP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPEP2 Gene

Pathways & Interactions for SNRPEP2 Gene

PathCards logo

SuperPathways for SNRPEP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPEP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPEP2 Gene

Drugs & Compounds for SNRPEP2 Gene

No Compound Related Data Available

Transcripts for SNRPEP2 Gene

mRNA/cDNA for SNRPEP2 Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPEP2 Gene

No ASD Table

Relevant External Links for SNRPEP2 Gene

GeneLoc Exon Structure for
SNRPEP2

Expression for SNRPEP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPEP2 Gene

Protein differential expression in normal tissues from HIPED for SNRPEP2 Gene

This gene is overexpressed in Brain (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for SNRPEP2 Gene



Protein tissue co-expression partners for SNRPEP2 Gene

- Elite partner
genes like me logo Genes that share expression patterns with SNRPEP2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPEP2 Gene

Orthologs for SNRPEP2 Gene

Evolution for SNRPEP2 Gene

ENSEMBL:
Gene Tree for SNRPEP2 (if available)
TreeFam:
Gene Tree for SNRPEP2 (if available)

No data available for Orthologs for SNRPEP2 Gene

Paralogs for SNRPEP2 Gene

No data available for Paralogs for SNRPEP2 Gene

Variants for SNRPEP2 Gene

Additional Variant Information for SNRPEP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPEP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP2 Gene

Disorders for SNRPEP2 Gene

No disorders were found for SNRPEP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP2 Gene

Publications for SNRPEP2 Gene

  1. PLEKHA4/kramer Attenuates Dishevelled Ubiquitination to Modulate Wnt and Planar Cell Polarity Signaling. (PMID: 31091453) Shami Shah A … Baskin JM (Cell reports 2019) 3
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3
  3. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. (PMID: 17643375) Jeronimo C … Coulombe B (Molecular cell 2007) 3

Products for SNRPEP2 Gene

Sources for SNRPEP2 Gene