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Aliases for SNRPEP10 Gene
Aliases for SNRPEP10 Gene
External Ids for SNRPEP10 Gene
- HGNC: 43575
- NCBI Entrez Gene: 100874424
- Ensembl: ENSG00000227002
Previous GeneCards Identifiers for SNRPEP10 Gene
- GC01M223832
Summaries for SNRPEP10 Gene
GeneCards Summary for SNRPEP10 Gene
SNRPEP10 (SNRPE Pseudogene 10) is a Pseudogene.
Additional gene information for SNRPEP10 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPEP10 Gene
Genomics for SNRPEP10 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for SNRPEP10 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J223642 | Enhancer | 0.6 | Ensembl | 250.7 | +1.9 | 1894 | 0.6 | ZIC2 ZNF341 PRDM6 RFX1 GLIS1 ZFP69B ZEB2 ZNF660 PATZ1 ZBTB17 | SNRPEP10 lnc-TP53BP2-5 CAPN8 GTF2IP20 HSALNG0010899 CCDC185 | |
| GH01J223652 | Enhancer | 1.1 | Ensembl ENCODE CraniofacialAtlas | 0.4 | -9.5 | -9506 | 4.2 | ZNF217 MBD2 FOXA2 RXRA CTBP1 FOSL1 JUND GATA3 TCF7L2 SMARCE1 | CAPN8 CAPN2 GTF2IP20 SNRPEP10 CCDC185 | |
| GH01J223664 | Promoter/Enhancer | 1.3 | EPDnew Ensembl ENCODE | 0.3 | -21.3 | -21317 | 2.2 | ZNF217 ELK1 MBD2 CTBP1 TCF7L2 SMARCE1 FOXA1 MAZ PKNOX1 DPF2 | CAPN8 CAPN2 GTF2IP20 SNRPEP10 CCDC185 | |
| GH01J223646 | Enhancer | 0.3 | Ensembl | 0.7 | -3.0 | -3007 | 2.8 | ZIC2 GLIS1 | CAPN8 GTF2IP20 SNRPEP10 CCDC185 | |
| GH01J223661 | Enhancer | 0.2 | Ensembl | 0.4 | -18.3 | -18307 | 0.2 | CAPN8 SNRPEP10 CCDC185 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SNRPEP10 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for SNRPEP10 Gene
Latest Assembly
- chr1:223,643,954-223,644,394
- (GRCh38/hg38)
- Size:
- 441 bases
- Orientation:
- Minus strand
Previous Assembly
- chr1:223,831,656-223,832,096
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 441 bases
- Orientation:
- Minus strand
- chr1:223,831,812-223,832,085
- (GRCh37/hg19 by Ensembl)
- Size:
- 274 bases
- Orientation:
- Minus strand
Genomic View for SNRPEP10 Gene
Genes around SNRPEP10 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1q41 by HGNC
- 1q41 by Entrez Gene
- 1q41 by Ensembl
SNRPEP10 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SNRPEP10 Gene
Proteins for SNRPEP10 Gene
Post-translational modifications for SNRPEP10 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNRPEP10
- Origene Custom Protein Services for SNRPEP10
Assay products for research
No data available for DME Specific Peptides for SNRPEP10 Gene
Domains & Families for SNRPEP10 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPEP10 Gene
Function for SNRPEP10 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SNRPEP10 - Starting at $85 >
- * SNRPEP10 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for SNRPEP10
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for SNRPEP10 - Starting at $45 >
- * SNRPEP10 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP10 Gene
Localization for SNRPEP10 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPEP10 Gene
Transcripts for SNRPEP10 Gene
mRNA/cDNA for SNRPEP10 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000420249 274 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for SNRPEP10 - Starting at $85 >
- * SNRPEP10 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for SNRPEP10
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for SNRPEP10 - Starting at $45 >
- * SNRPEP10 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for SNRPEP10 Gene
- GeneLoc Exon Structure for
- SNRPEP10
Expression for SNRPEP10 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPEP10 Gene
Orthologs for SNRPEP10 Gene
No data available for Orthologs for SNRPEP10 Gene
Paralogs for SNRPEP10 Gene
No data available for Paralogs for SNRPEP10 Gene
Variants for SNRPEP10 Gene
Additional Variant Information for SNRPEP10 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SNRPEP10
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP10 Gene
Disorders for SNRPEP10 Gene
No disorders were found for SNRPEP10 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP10 Gene
Publications for SNRPEP10 Gene
No publications were found for SNRPEP10 Gene.
No data available for Mastermind for SNRPEP10 Gene
Products for SNRPEP10 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNRPEP10
- Origene Custom Protein Services for SNRPEP10
- Browse OriGene Inhibitory RNA Products For SNRPEP10
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SNRPEP10
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SNRPEP10
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for SNRPEP10
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for SNRPEP10
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SNRPEP10
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for SNRPEP10
Sources for SNRPEP10 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB