Aliases for SNRPD2P1 Gene

Aliases for SNRPD2P1 Gene

  • Small Nuclear Ribonucleoprotein D2 Pseudogene 1 2 3 5
  • BA478K7.1 2 3
  • Small Nuclear Ribonucleoprotein D2 Pseudogene 2
  • SNRPD2P1 5
  • SNRPD2P 3

External Ids for SNRPD2P1 Gene

Previous HGNC Symbols for SNRPD2P1 Gene

  • SNRPD2P

Previous GeneCards Identifiers for SNRPD2P1 Gene

  • GC10P091739
  • GC10P085372

Summaries for SNRPD2P1 Gene

GeneCards Summary for SNRPD2P1 Gene

SNRPD2P1 (Small Nuclear Ribonucleoprotein D2 Pseudogene 1) is a Pseudogene.

Additional gene information for SNRPD2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPD2P1 Gene

Genomics for SNRPD2P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPD2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J089959 Enhancer 0.7 Ensembl 0.4 -18.8 -18761 0.2 BACH1 PKNOX1 EED ARID3A DPF2 RELB RUNX3 GATAD2B NFE2 CBFB LINC01375 SNRPD2P1 LINC01374 KIF20B HTR7
GH10J089971 Enhancer 0.3 Ensembl 0.4 -6.6 -6561 0.2 GLIS1 SNRPD2P1 LINC01375 LINC01374 KIF20B HTR7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPD2P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPD2P1 Gene

Genomic Locations for SNRPD2P1 Gene
chr10:89,978,662-89,979,168
(GRCh38/hg38)
Size:
507 bases
Orientation:
Plus strand
chr10:91,738,419-91,738,925
(GRCh37/hg19)
Size:
507 bases
Orientation:
Plus strand

Genomic View for SNRPD2P1 Gene

Genes around SNRPD2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPD2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPD2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPD2P1 Gene

Proteins for SNRPD2P1 Gene

Post-translational modifications for SNRPD2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPD2P1 Gene

Domains & Families for SNRPD2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPD2P1 Gene

Function for SNRPD2P1 Gene

Phenotypes From GWAS Catalog for SNRPD2P1 Gene

Phenotypes for SNRPD2P1 Gene

GenomeRNAi human phenotypes for SNRPD2P1:
genes like me logo Genes that share phenotypes with SNRPD2P1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPD2P1 Gene

Localization for SNRPD2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPD2P1 Gene

Pathways & Interactions for SNRPD2P1 Gene

PathCards logo

SuperPathways for SNRPD2P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPD2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPD2P1 Gene

Drugs & Compounds for SNRPD2P1 Gene

No Compound Related Data Available

Transcripts for SNRPD2P1 Gene

mRNA/cDNA for SNRPD2P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPD2P1 Gene

No ASD Table

Relevant External Links for SNRPD2P1 Gene

GeneLoc Exon Structure for
SNRPD2P1

Expression for SNRPD2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPD2P1 Gene

genes like me logo Genes that share expression patterns with SNRPD2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPD2P1 Gene

Orthologs for SNRPD2P1 Gene

Evolution for SNRPD2P1 Gene

ENSEMBL:
Gene Tree for SNRPD2P1 (if available)
TreeFam:
Gene Tree for SNRPD2P1 (if available)

No data available for Orthologs for SNRPD2P1 Gene

Paralogs for SNRPD2P1 Gene

No data available for Paralogs for SNRPD2P1 Gene

Variants for SNRPD2P1 Gene

Additional Variant Information for SNRPD2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPD2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPD2P1 Gene

Disorders for SNRPD2P1 Gene

Additional Disease Information for SNRPD2P1

Genetic Association Database
(GAD)

No disorders were found for SNRPD2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNRPD2P1 Gene

Publications for SNRPD2P1 Gene

  1. Importin 8 is a gene silencing factor that targets argonaute proteins to distinct mRNAs. (PMID: 19167051) Weinmann L … Meister G (Cell 2009) 3
  2. Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. (PMID: 17643375) Jeronimo C … Coulombe B (Molecular cell 2007) 3
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 41
  4. Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. (PMID: 15324660) Jin J … Pawson T (Current biology : CB 2004) 3

Products for SNRPD2P1 Gene

Sources for SNRPD2P1 Gene