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Aliases for SNRPCP4 Gene

Subcategory (RNA class) for SNRPCP4 Gene

antisense

Aliases for SNRPCP4 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 4 2 3 5

External Ids for SNRPCP4 Gene

ORGUL Members for SNRPCP4 Gene

Summaries for SNRPCP4 Gene

GeneCards Summary for SNRPCP4 Gene

SNRPCP4 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 4) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for SNRPCP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPCP4 Gene

Genomics for SNRPCP4 Gene

GeneHancer (GH) Regulatory Elements for SNRPCP4 Gene

Promoters and enhancers for SNRPCP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J002987 Enhancer 0.8 Ensembl ENCODE dbSUPER 650.7 -2.0 -1967 2.1 RXRA ZNF26 SNRPCP4 LPIN2 ENSG00000252258 METTL4 MYOM1 EMILIN2 ENSG00000266783 LOC105371963
GH18J002993 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +4.4 4445 2.8 HDGF PKNOX1 ATF1 ARNT TCF12 ZNF766 ZNF143 ATF7 RUNX3 NCOA1 ENSG00000252258 SMCHD1 MYOM1 LPIN2 EMILIN2 METTL4 CBX3P2 SNRPCP4
GH18J002975 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.1 -9103 12 PKNOX1 FOXA2 SMAD1 MLX ARID4B IRF4 YY1 SLC30A9 FOS SP5 LPIN2 EMILIN2 ENSG00000252258 MYOM1 SMCHD1 TGIF1 MYL12B SNRPCP4 LOC105371963
GH18J002965 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -21.0 -21045 8.1 HDGF PKNOX1 FOXA2 SMAD1 YY1 EGR1 ATF7 BCLAF1 IKZF2 RUNX3 LPIN2 ENSG00000252258 EMILIN2 DLGAP1-AS1 TGIF1 SMCHD1 MYL12B LOC105371963 SNRPCP4
GH18J002996 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +7.9 7855 3 SRF PKNOX1 RXRA JUNB BATF NR2F2 CC2D1A SP1 PRDM6 IKZF1 ENSG00000252258 LPIN2 MYOM1 EMILIN2 SNRPCP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNRPCP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPCP4 Gene

Genomic Locations for SNRPCP4 Gene
chr18:2,990,650-2,991,312
(GRCh38/hg38)
Size:
663 bases
Orientation:
Plus strand
chr18:2,990,648-2,991,310
(GRCh37/hg19)
Size:
663 bases
Orientation:
Plus strand

Genomic View for SNRPCP4 Gene

Genes around SNRPCP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPCP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPCP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPCP4 Gene

Function for SNRPCP4 Gene

Phenotypes From GWAS Catalog for SNRPCP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP4 Gene

Localization for SNRPCP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP4 Gene

Pathways & Interactions for SNRPCP4 Gene

SuperPathways for SNRPCP4 Gene

No Data Available

Interacting Proteins for SNRPCP4 Gene

Gene Ontology (GO) - Biological Process for SNRPCP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPCP4 Gene

Drugs & Compounds for SNRPCP4 Gene

No Compound Related Data Available

Transcripts for SNRPCP4 Gene

mRNA/cDNA for SNRPCP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPCP4 Gene

No ASD Table

Relevant External Links for SNRPCP4 Gene

GeneLoc Exon Structure for
SNRPCP4
ECgene alternative splicing isoforms for
SNRPCP4

Expression for SNRPCP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPCP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPCP4 Gene:

SNRPCP4
genes like me logo Genes that share expression patterns with SNRPCP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP4 Gene

Orthologs for SNRPCP4 Gene

Evolution for SNRPCP4 Gene

ENSEMBL:
Gene Tree for SNRPCP4 (if available)
TreeFam:
Gene Tree for SNRPCP4 (if available)

No data available for Orthologs for SNRPCP4 Gene

Paralogs for SNRPCP4 Gene

No data available for Paralogs for SNRPCP4 Gene

Variants for SNRPCP4 Gene

Additional Variant Information for SNRPCP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPCP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP4 Gene

Disorders for SNRPCP4 Gene

No disorders were found for SNRPCP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP4 Gene

Publications for SNRPCP4 Gene

No publications were found for SNRPCP4 Gene.

Products for SNRPCP4 Gene

Sources for SNRPCP4 Gene

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