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Aliases for SNRPCP16 Gene
Aliases for SNRPCP16 Gene
External Ids for SNRPCP16 Gene
- HGNC: 49831
- Entrez Gene: 106480291
- Ensembl: ENSG00000250342
Previous GeneCards Identifiers for SNRPCP16 Gene
- GC00U935822
Summaries for SNRPCP16 Gene
GeneCards Summary for SNRPCP16 Gene
SNRPCP16 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16) is a Pseudogene.
Additional gene information for SNRPCP16 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPCP16 Gene
Genomics for SNRPCP16 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for SNRPCP16 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH04J009151 | Promoter/Enhancer | 1.9 | FANTOM5 Ensembl ENCODE CraniofacialAtlas | 5.1 | -100.9 | -100868 | 3.4 | CREB1 PRDM10 ZNF629 TFE3 RFX1 IKZF1 ZNF692 RBFOX2 RXRB PATZ1 | FAM86KP LOC105369250 piR-41981-005 piR-56774-004 SNRPCP16 FAM90A26 ENSG00000288075 HMX1 | |
| GH04J009072 | Enhancer | 0.3 | ENCODE | 7.8 | -21.0 | -21023 | 1 | RFX1 BMI1 | SNRPCP16 OR7E84P RF02002-036 piR-32214-512 LOC105369250 FAM90A26 HMX1 ENSG00000288075 | |
| GH04J009012 | Enhancer | 0.2 | Ensembl | 8.2 | +39.0 | 38950 | 0.6 | SNRPCP16 HSALNG0032794 piR-53609-007 HMX1 FAM90A26 | ||
| GH04J009105 | Enhancer | 0.2 | Ensembl | 5.2 | -54.2 | -54150 | 0.8 | SNRPCP16 piR-37656-174 piR-46501-068 ENPP7P10 LOC105369250 FAM90A26 HMX1 ENSG00000288075 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around SNRPCP16 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for SNRPCP16 Gene
Genomic Locations for SNRPCP16 Gene
- chr4:9,051,799-9,052,051
- (GRCh38/hg38)
- Size:
- 253 bases
- Orientation:
- Minus strand
Genomic View for SNRPCP16 Gene
Genes around SNRPCP16 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4p16.1 by HGNC
- 4p16.1 by Entrez Gene
- 4p16.1 by Ensembl
SNRPCP16 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for SNRPCP16 Gene
Proteins for SNRPCP16 Gene
Post-translational modifications for SNRPCP16 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNRPCP16
- Origene Custom Protein Services for SNRPCP16
No data available for DME Specific Peptides for SNRPCP16 Gene
Domains & Families for SNRPCP16 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPCP16 Gene
Function for SNRPCP16 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for SNRPCP16
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP16 Gene
Localization for SNRPCP16 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP16 Gene
Transcripts for SNRPCP16 Gene
mRNA/cDNA for SNRPCP16 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000506029 210 nts (view in UCSC)
CRISPR Products
- Browse CRISPR knockouts for SNRPCP16
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for SNRPCP16 Gene
- GeneLoc Exon Structure for
- SNRPCP16
Expression for SNRPCP16 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP16 Gene
Orthologs for SNRPCP16 Gene
No data available for Orthologs for SNRPCP16 Gene
Paralogs for SNRPCP16 Gene
No data available for Paralogs for SNRPCP16 Gene
Variants for SNRPCP16 Gene
Additional Variant Information for SNRPCP16 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- SNRPCP16
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP16 Gene
Disorders for SNRPCP16 Gene
No disorders were found for SNRPCP16 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP16 Gene
Publications for SNRPCP16 Gene
No publications were found for SNRPCP16 Gene.
No data available for Mastermind for SNRPCP16 Gene
Products for SNRPCP16 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for SNRPCP16
- Origene Custom Protein Services for SNRPCP16
- Browse OriGene Inhibitory RNA Products For SNRPCP16
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for SNRPCP16
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For SNRPCP16
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for SNRPCP16
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for SNRPCP16
- Search GeneCopoeia for miRNA 3'UTR Target clone products for SNRPCP16
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for SNRPCP16
Sources for SNRPCP16 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB