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Aliases for SNRPCP16 Gene

Subcategory (RNA class) for SNRPCP16 Gene

lncRNA

Aliases for SNRPCP16 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16 2 3 5

External Ids for SNRPCP16 Gene

ORGUL Members for SNRPCP16 Gene

Previous GeneCards Identifiers for SNRPCP16 Gene

  • GC00U935822

Summaries for SNRPCP16 Gene

GeneCards Summary for SNRPCP16 Gene

SNRPCP16 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SNRPCP16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPCP16 Gene

Genomics for SNRPCP16 Gene

GeneHancer (GH) Regulatory Elements for SNRPCP16 Gene

Promoters and enhancers for SNRPCP16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J009151 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE 5.1 -101.1 -101067 3 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 POLR2B GLIS2 FAM86KP SNRPCP16 GC04M009091 GC04P009085
GH04J009072 Enhancer 0.6 Ensembl ENCODE 7.8 -21.0 -21023 1 RFX1 BMI1 SNRPCP16 OR7E84P ENPP7P10
GH04J009123 Enhancer 0.7 Ensembl 5.8 -71.6 -71644 0.6 CTCF FOXA2 ZNF2 RAD21 ZNF335 ZNF316 FOXK2 MAFK TCF7L2 ZNF654 GC04M009091 SNRPCP16 FAM86KP GC04P009085 ENPP7P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNRPCP16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPCP16 Gene

Genomic Locations for SNRPCP16 Gene
chr4:9,051,842-9,052,051
(GRCh38/hg38)
Size:
210 bases
Orientation:
Minus strand

Genomic View for SNRPCP16 Gene

Genes around SNRPCP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPCP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPCP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPCP16 Gene

Function for SNRPCP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP16 Gene

Localization for SNRPCP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP16 Gene

Pathways & Interactions for SNRPCP16 Gene

SuperPathways for SNRPCP16 Gene

No Data Available

Interacting Proteins for SNRPCP16 Gene

Gene Ontology (GO) - Biological Process for SNRPCP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPCP16 Gene

Drugs & Compounds for SNRPCP16 Gene

No Compound Related Data Available

Transcripts for SNRPCP16 Gene

mRNA/cDNA for SNRPCP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPCP16 Gene

No ASD Table

Relevant External Links for SNRPCP16 Gene

GeneLoc Exon Structure for
SNRPCP16
ECgene alternative splicing isoforms for
SNRPCP16

Expression for SNRPCP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPCP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPCP16 Gene:

SNRPCP16
genes like me logo Genes that share expression patterns with SNRPCP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP16 Gene

Orthologs for SNRPCP16 Gene

Evolution for SNRPCP16 Gene

ENSEMBL:
Gene Tree for SNRPCP16 (if available)
TreeFam:
Gene Tree for SNRPCP16 (if available)

No data available for Orthologs for SNRPCP16 Gene

Paralogs for SNRPCP16 Gene

No data available for Paralogs for SNRPCP16 Gene

Variants for SNRPCP16 Gene

Additional Variant Information for SNRPCP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPCP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP16 Gene

Disorders for SNRPCP16 Gene

No disorders were found for SNRPCP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP16 Gene

Publications for SNRPCP16 Gene

No publications were found for SNRPCP16 Gene.

Products for SNRPCP16 Gene

Sources for SNRPCP16 Gene

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