Aliases for SNRPCP16 Gene

Aliases for SNRPCP16 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16 2 3 5
  • SNRPCP16 5

External Ids for SNRPCP16 Gene

Previous GeneCards Identifiers for SNRPCP16 Gene

  • GC00U935822

Summaries for SNRPCP16 Gene

GeneCards Summary for SNRPCP16 Gene

SNRPCP16 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16) is a Pseudogene.

Additional gene information for SNRPCP16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPCP16 Gene

Genomics for SNRPCP16 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPCP16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J009151 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas 5.1 -100.9 -100868 3.4 CREB1 PRDM10 ZNF629 TFE3 RFX1 IKZF1 ZNF692 RBFOX2 RXRB PATZ1 FAM86KP LOC105369250 piR-41981-005 piR-56774-004 SNRPCP16 FAM90A26 ENSG00000288075 HMX1
GH04J009072 Enhancer 0.3 ENCODE 7.8 -21.0 -21023 1 RFX1 BMI1 SNRPCP16 OR7E84P RF02002-036 piR-32214-512 LOC105369250 FAM90A26 HMX1 ENSG00000288075
GH04J009012 Enhancer 0.2 Ensembl 8.2 +39.0 38950 0.6 SNRPCP16 HSALNG0032794 piR-53609-007 HMX1 FAM90A26
GH04J009105 Enhancer 0.2 Ensembl 5.2 -54.2 -54150 0.8 SNRPCP16 piR-37656-174 piR-46501-068 ENPP7P10 LOC105369250 FAM90A26 HMX1 ENSG00000288075
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPCP16 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPCP16 Gene

Genomic Locations for SNRPCP16 Gene
chr4:9,051,799-9,052,051
(GRCh38/hg38)
Size:
253 bases
Orientation:
Minus strand

Genomic View for SNRPCP16 Gene

Genes around SNRPCP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPCP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPCP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPCP16 Gene

Proteins for SNRPCP16 Gene

Post-translational modifications for SNRPCP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPCP16 Gene

Domains & Families for SNRPCP16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPCP16 Gene

Function for SNRPCP16 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP16 Gene

Localization for SNRPCP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP16 Gene

Pathways & Interactions for SNRPCP16 Gene

PathCards logo

SuperPathways for SNRPCP16 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPCP16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPCP16 Gene

Drugs & Compounds for SNRPCP16 Gene

No Compound Related Data Available

Transcripts for SNRPCP16 Gene

mRNA/cDNA for SNRPCP16 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPCP16 Gene

No ASD Table

Relevant External Links for SNRPCP16 Gene

GeneLoc Exon Structure for
SNRPCP16

Expression for SNRPCP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPCP16 Gene

genes like me logo Genes that share expression patterns with SNRPCP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP16 Gene

Orthologs for SNRPCP16 Gene

Evolution for SNRPCP16 Gene

ENSEMBL:
Gene Tree for SNRPCP16 (if available)
TreeFam:
Gene Tree for SNRPCP16 (if available)

No data available for Orthologs for SNRPCP16 Gene

Paralogs for SNRPCP16 Gene

No data available for Paralogs for SNRPCP16 Gene

Variants for SNRPCP16 Gene

Additional Variant Information for SNRPCP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPCP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP16 Gene

Disorders for SNRPCP16 Gene

No disorders were found for SNRPCP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP16 Gene

Publications for SNRPCP16 Gene

No publications were found for SNRPCP16 Gene.

No data available for Mastermind for SNRPCP16 Gene

Products for SNRPCP16 Gene

Sources for SNRPCP16 Gene