Aliases for SNRPCP12 Gene

Aliases for SNRPCP12 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 12 2 3

External Ids for SNRPCP12 Gene

Previous GeneCards Identifiers for SNRPCP12 Gene

  • GC11P067658
  • GC11P067886

Summaries for SNRPCP12 Gene

GeneCards Summary for SNRPCP12 Gene

SNRPCP12 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 12) is a Pseudogene.

Additional gene information for SNRPCP12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPCP12 Gene

Genomics for SNRPCP12 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNRPCP12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J067907 Enhancer 0.6 Ensembl 250.7 +1.7 1704 0.2 NFIC TAL1 NFE2 HDAC2 NRF1 TCF12 MTA2 HDAC1 DPF2 ARID1B SNRPCP12 piR-31978-002 piR-61537-001 ENSG00000255031 lnc-UNC93B1-3 LOC112268076 HSALNG0085186 HSALNG0085198 HSALNG0085187 ALDH3B2
GH11J067902 Enhancer 0.3 Ensembl 0.7 -2.3 -2296 0.2 RAD51 SNRPCP12 RNU6-46P LINC02754 lnc-UNC93B1-3 LOC112268076 HSALNG0085198 HSALNG0085186 HSALNG0085187 ALDH3B2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPCP12 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNRPCP12 Gene

Latest Assembly
chr11:67,905,397-67,906,177
(GRCh38/hg38)
Size:
781 bases
Orientation:
Plus strand

Previous Assembly
chr11:67,672,868-67,673,648
(GRCh37/hg19 by Entrez Gene)
Size:
781 bases
Orientation:
Plus strand

Genomic View for SNRPCP12 Gene

Genes around SNRPCP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPCP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPCP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPCP12 Gene

Proteins for SNRPCP12 Gene

Post-translational modifications for SNRPCP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPCP12 Gene

Domains & Families for SNRPCP12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPCP12 Gene

Function for SNRPCP12 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP12 Gene

Localization for SNRPCP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP12 Gene

Pathways & Interactions for SNRPCP12 Gene

PathCards logo

SuperPathways for SNRPCP12 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNRPCP12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPCP12 Gene

Drugs & Compounds for SNRPCP12 Gene

No Compound Related Data Available

Transcripts for SNRPCP12 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPCP12 Gene

No ASD Table

Relevant External Links for SNRPCP12 Gene

GeneLoc Exon Structure for
SNRPCP12

No data available for mRNA/cDNA for SNRPCP12 Gene

Expression for SNRPCP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPCP12 Gene

mRNA differential expression in normal tissues according to GTEx for SNRPCP12 Gene

This gene is overexpressed in Liver (x16.2), Kidney - Cortex (x9.7), and Small Intestine - Terminal Ileum (x5.5).
genes like me logo Genes that share expression patterns with SNRPCP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP12 Gene

Orthologs for SNRPCP12 Gene

No data available for Orthologs and Evolution for SNRPCP12 Gene

Paralogs for SNRPCP12 Gene

No data available for Paralogs for SNRPCP12 Gene

Variants for SNRPCP12 Gene

Additional Variant Information for SNRPCP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPCP12
Leiden Open Variation Database (LOVD)
SNRPCP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP12 Gene

Disorders for SNRPCP12 Gene

No disorders were found for SNRPCP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP12 Gene

Publications for SNRPCP12 Gene

No publications were found for SNRPCP12 Gene.

No data available for Mastermind for SNRPCP12 Gene

Products for SNRPCP12 Gene

Sources for SNRPCP12 Gene