Aliases for SNRPBP1 Gene

Aliases for SNRPBP1 Gene

  • Small Nuclear Ribonucleoprotein Polypeptides B And B1 Pseudogene 1 2 3 5

External Ids for SNRPBP1 Gene

Previous GeneCards Identifiers for SNRPBP1 Gene

  • GC07U903054
  • GC07M074609
  • GC07M080007

Summaries for SNRPBP1 Gene

GeneCards Summary for SNRPBP1 Gene

SNRPBP1 (Small Nuclear Ribonucleoprotein Polypeptides B And B1 Pseudogene 1) is a Pseudogene.

Additional gene information for SNRPBP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNRPBP1 Gene

Genomics for SNRPBP1 Gene

GeneHancer (GH) Regulatory Elements for SNRPBP1 Gene

Promoters and enhancers for SNRPBP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J080379 Enhancer 0.7 Ensembl ENCODE 500.7 -1.5 -1466 1.4 JUND FOS JUN ZNF384 YY1 POLR2A PKNOX1 SIN3A SNRPBP1 lnc-GNAT3-3 CD36 ENSG00000232667
GH07J080385 Enhancer 0.7 Ensembl 0.4 -8.0 -7966 1.6 TCF12 FOXA2 NR2F2 CEBPB ZBTB33 NR3C1 JUND STAT3 RAD21 RXRA ENSG00000232667 SNRPBP1 lnc-GNAT3-3 CD36
GH07J080387 Enhancer 0.5 Ensembl 0.4 -10.1 -10066 0.2 MXI1 RCOR1 RAD21 SMARCA4 CHD2 PRDM10 ZNF140 ENSG00000232667 lnc-GNAT3-3 SNRPBP1 CD36
GH07J080386 Enhancer 0.2 Ensembl 0.4 -9.2 -9165 0.4 ENSG00000232667 SNRPBP1 lnc-GNAT3-3 CD36
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNRPBP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNRPBP1 Gene

Genomic Locations for SNRPBP1 Gene
chr7:80,377,554-80,377,835
(GRCh38/hg38)
Size:
282 bases
Orientation:
Minus strand
chr7:80,006,870-80,007,151
(GRCh37/hg19)
Size:
282 bases
Orientation:
Minus strand

Genomic View for SNRPBP1 Gene

Genes around SNRPBP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPBP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPBP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPBP1 Gene

Proteins for SNRPBP1 Gene

Post-translational modifications for SNRPBP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPBP1 Gene

Domains & Families for SNRPBP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNRPBP1 Gene

Function for SNRPBP1 Gene

Phenotypes From GWAS Catalog for SNRPBP1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPBP1 Gene

Localization for SNRPBP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPBP1 Gene

Pathways & Interactions for SNRPBP1 Gene

PathCards logo

SuperPathways for SNRPBP1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNRPBP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNRPBP1 Gene

Drugs & Compounds for SNRPBP1 Gene

No Compound Related Data Available

Transcripts for SNRPBP1 Gene

mRNA/cDNA for SNRPBP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPBP1 Gene

No ASD Table

Relevant External Links for SNRPBP1 Gene

GeneLoc Exon Structure for
SNRPBP1

Expression for SNRPBP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPBP1 Gene

genes like me logo Genes that share expression patterns with SNRPBP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPBP1 Gene

Orthologs for SNRPBP1 Gene

Evolution for SNRPBP1 Gene

ENSEMBL:
Gene Tree for SNRPBP1 (if available)
TreeFam:
Gene Tree for SNRPBP1 (if available)

No data available for Orthologs for SNRPBP1 Gene

Paralogs for SNRPBP1 Gene

No data available for Paralogs for SNRPBP1 Gene

Variants for SNRPBP1 Gene

Additional Variant Information for SNRPBP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPBP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPBP1 Gene

Disorders for SNRPBP1 Gene

No disorders were found for SNRPBP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPBP1 Gene

Publications for SNRPBP1 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 54

Products for SNRPBP1 Gene

Sources for SNRPBP1 Gene