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Aliases for SNORD84 Gene

Subcategory (RNA class) for SNORD84 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNORD84 Gene

  • Small Nucleolar RNA, C/D Box 84 2 3 5
  • U84 3

External Ids for SNORD84 Gene

Previous GeneCards Identifiers for SNORD84 Gene

  • GC06U900829
  • GC06M031623
  • GC06M031625
  • GC06M031497
  • GC06M031508
  • GC06M031544
  • GC06M031570
  • GC06M031589
  • GC06M031755
  • GC06M031776
  • GC06M031823
  • GC06M031875
  • GC06M031913

Summaries for SNORD84 Gene

GeneCards Summary for SNORD84 Gene

SNORD84 (Small Nucleolar RNA, C/D Box 84) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SNORD84 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD84 Gene

Genomics for SNORD84 Gene

GeneHancer (GH) Regulatory Elements for SNORD84 Gene

Promoters and enhancers for SNORD84 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J031538 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 +0.0 39 4.9 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 ZNF263 DDX39B GC06M031542 GC06M031543 GC06M031550 GC06M031555 GC06M031573 GC06M032007 GC06M032013 GC06M032015 PIR32498
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD84 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD84 gene promoter:
  • c-Fos
  • AP-1
  • c-Jun
  • ATF-2
  • p53

Genomic Locations for SNORD84 Gene

Genomic Locations for SNORD84 Gene
78 bases
Minus strand
78 bases
Minus strand

Genomic View for SNORD84 Gene

Genes around SNORD84 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD84 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD84 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for SNORD84 Gene

Post-translational modifications for SNORD84 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD84 Gene

Domains & Families for SNORD84 Gene

Gene Families for SNORD84 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD84: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD84 Gene

Function for SNORD84 Gene

Phenotypes From GWAS Catalog for SNORD84 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD84 Gene

Localization for SNORD84 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD84 Gene

Pathways & Interactions for SNORD84 Gene

SuperPathways for SNORD84 Gene

No Data Available

Interacting Proteins for SNORD84 Gene

Gene Ontology (GO) - Biological Process for SNORD84 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD84 Gene

Drugs & Compounds for SNORD84 Gene

No Compound Related Data Available

Transcripts for SNORD84 Gene

mRNA/cDNA for SNORD84 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD84 Gene

No ASD Table

Relevant External Links for SNORD84 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD84 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD84 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD84 Gene:

genes like me logo Genes that share expression patterns with SNORD84: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD84 Gene

Orthologs for SNORD84 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD84 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD83 34
  • 100 (a)
(Bos Taurus)
Mammalia SNORD83 34
  • 87 (a)
(Mus musculus)
Mammalia Gm22589 34
  • 86 (a)
(Canis familiaris)
Mammalia SNORD83 34
  • 83 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD83 34
  • 80 (a)
(Monodelphis domestica)
Mammalia SNORD83 34
  • 79 (a)
(Gallus gallus)
Aves SNORD83 34
  • 70 (a)
(Anolis carolinensis)
Reptilia SNORD83 34
  • 63 (a)
(Danio rerio)
Actinopterygii SNORD83 34
  • 70 (a)
sea squirt
(Ciona savignyi)
Ascidiacea SNORD83 34 34
  • 75 (a)
Species where no ortholog for SNORD84 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD84 Gene

Gene Tree for SNORD84 (if available)
Gene Tree for SNORD84 (if available)

Paralogs for SNORD84 Gene

No data available for Paralogs for SNORD84 Gene

Variants for SNORD84 Gene

Sequence variations from dbSNP and Humsavar for SNORD84 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000206682 -- 31,543,039(-) C/T upstream_transcript_variant
rs1003091793 -- 31,541,666(-) T/C upstream_transcript_variant
rs1005744200 -- 31,542,507(-) T/A upstream_transcript_variant
rs1005852001 -- 31,542,047(-) G/T upstream_transcript_variant
rs1006441928 -- 31,541,261(-) C/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD84 Gene

Variant ID Type Subtype PubMed ID
nsv830627 CNV loss 17160897
nsv470809 CNV loss 18288195
nsv1126749 CNV deletion 24896259
nsv1112900 CNV deletion 24896259
nsv1073969 CNV deletion 25765185
esv2759414 CNV gain+loss 17122850
dgv10404n54 CNV loss 21841781
dgv10403n54 CNV loss 21841781

Additional Variant Information for SNORD84 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD84 Gene

Disorders for SNORD84 Gene

Additional Disease Information for SNORD84

No disorders were found for SNORD84 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD84 Gene

Publications for SNORD84 Gene

  1. Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2'-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs. (PMID: 10684929) Jády BE … Kiss T (Nucleic acids research 2000) 2 3 58
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD84 Gene

Sources for SNORD84 Gene

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