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Aliases for SNORD75 Gene

Subcategory (RNA class) for SNORD75 Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORD75 Gene

  • Small Nucleolar RNA, C/D Box 75 2 3
  • U75 3

External Ids for SNORD75 Gene

ORGUL Members for SNORD75 Gene

Previous GeneCards Identifiers for SNORD75 Gene

  • GC01U901236
  • GC01M172155
  • GC01M172167
  • GC01M172178
  • GC01M173841
  • GC01M173848
  • GC01M145060
  • GC01M173859
  • GC01M173869
  • GC01M173879
  • GC01M173888
  • GC01M173902
  • GC01M173915
  • GC01M173935
  • GC01M173945
  • GC01M173959
  • GC01M174057
  • GC01M173975
  • GC01M173983
  • GC01M173987
  • GC01M173995
  • GC01M174005
  • GC01M174019
  • GC01M174032
  • GC01M174045

Summaries for SNORD75 Gene

GeneCards Summary for SNORD75 Gene

SNORD75 (Small Nucleolar RNA, C/D Box 75) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD75 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD75 Gene

Genomics for SNORD75 Gene

GeneHancer (GH) Regulatory Elements for SNORD75 Gene

Promoters and enhancers for SNORD75 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J173861 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 +0.2 178 10.3 MTA3 ZFX SP1 ELF3 CBFA2T2 ZNF148 NKRF POLR2A MLLT1 GTF2F1 CENPL ZBTB37 GC01M174067 GC01M174080 GC01M174082 GC01M174083 GC01M174085 GC01M174086 GC01M174087 GC01M174091
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORD75 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD75 gene promoter:
  • AP-1
  • c-Fos
  • c-Jun
  • CREB
  • deltaCREB
  • FosB
  • Ik-2
  • IRF-1
  • LCR-F1
  • Pax-4a

Genomic Locations for SNORD75 Gene

Genomic Locations for SNORD75 Gene
chr1:173,866,879-173,866,938
(GRCh38/hg38)
Size:
60 bases
Orientation:
Minus strand
chr1:173,836,017-173,836,076
(GRCh37/hg19)
Size:
60 bases
Orientation:
Minus strand

Genomic View for SNORD75 Gene

Genes around SNORD75 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD75 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD75 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD75 Gene

Proteins for SNORD75 Gene

Post-translational modifications for SNORD75 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD75 Gene

Domains & Families for SNORD75 Gene

Gene Families for SNORD75 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD75: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD75 Gene

Function for SNORD75 Gene

Phenotypes From GWAS Catalog for SNORD75 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD75 Gene

Localization for SNORD75 Gene

Gene Ontology (GO) - Cellular Components for SNORD75 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORD75: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORD75 Gene

Pathways & Interactions for SNORD75 Gene

PathCards logo

SuperPathways for SNORD75 Gene

No Data Available

Interacting Proteins for SNORD75 Gene

Gene Ontology (GO) - Biological Process for SNORD75 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORD75: view

No data available for Pathways by source and SIGNOR curated interactions for SNORD75 Gene

Drugs & Compounds for SNORD75 Gene

No Compound Related Data Available

Transcripts for SNORD75 Gene

mRNA/cDNA for SNORD75 Gene

(1) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD75 Gene

No ASD Table

Relevant External Links for SNORD75 Gene

GeneLoc Exon Structure for
SNORD75
ECgene alternative splicing isoforms for
SNORD75

Expression for SNORD75 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD75 Gene:

SNORD75
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD75 Gene

Orthologs for SNORD75 Gene

No data available for Orthologs and Evolution for SNORD75 Gene

Paralogs for SNORD75 Gene

No data available for Paralogs for SNORD75 Gene

Variants for SNORD75 Gene

Sequence variations from dbSNP and Humsavar for SNORD75 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000056001 -- 173,867,389(-) G/A upstream_transcript_variant
rs1000127752 -- 173,867,669(-) A/G upstream_transcript_variant
rs1000247329 -- 173,868,599(-) C/T upstream_transcript_variant
rs1000450082 -- 173,868,415(-) G/A upstream_transcript_variant
rs1000500475 -- 173,868,214(-) T/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD75 Gene

Variant ID Type Subtype PubMed ID
esv2758978 CNV loss 17122850
nsv831926 CNV gain+loss 17160897

Additional Variant Information for SNORD75 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD75

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD75 Gene

Disorders for SNORD75 Gene

Additional Disease Information for SNORD75

No disorders were found for SNORD75 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD75 Gene

Publications for SNORD75 Gene

  1. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski KT … Steitz JA (Current biology : CB 2004) 2 3 58
  2. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith CM … Steitz JA (Molecular and cellular biology 1998) 2 3 58
  3. TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions. (PMID: 27609421) Banks CA … Washburn MP (Molecular & cellular proteomics : MCP 2016) 3 58
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD75 Gene

Sources for SNORD75 Gene

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