Aliases for SNORD74B Gene

Subcategory (RNA class) for SNORD74B Gene

snoRNA

Quality Score for this RNA gene is

14

Aliases for SNORD74B Gene

  • Small Nucleolar RNA, C/D Box 74B 2 3 5
  • SNORD74L5 176
  • SNORD74B 2
  • RF00284 174

External Ids for SNORD74B Gene

Previous GeneCards Identifiers for SNORD74B Gene

  • GC00U936754
  • GC21U900878

Summaries for SNORD74B Gene

GeneCards Summary for SNORD74B Gene

SNORD74B (Small Nucleolar RNA, C/D Box 74B) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORD74B Gene

  • Small nucleolar RNA SNORD74

Additional gene information for SNORD74B Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORD74B Gene

Genomics for SNORD74B Gene

GeneHancer (GH) Regulatory Elements for SNORD74B Gene

Promoters and enhancers for SNORD74B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J016284 Enhancer 0.5 Ensembl CraniofacialAtlas 750.6 -0.5 -533 3 PKNOX1 ZSCAN4 SNORD74B ENSG00000270071 MIR99AHG
GH21J016304 Promoter/Enhancer 2.2 VISTA FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.8 -22.8 -22784 5.9 SP1 CREM FOXA2 CEBPB POLR2A ATF7 PRDM1 USF1 RFX5 YY1 SNORD74B MIR99AHG ENSG00000270071
GH21J016169 Enhancer 0.9 Ensembl ENCODE 10.9 +115.4 115367 2.4 CTBP1 ZNF384 MAFK SP7 PKNOX1 BRCA1 ZNF629 CEBPB JUN JUND SNORD74B RNU6-426P RF00994-594 piR-48209-445 MIR99AHG
GH21J016123 Enhancer 0.8 ENCODE CraniofacialAtlas 10 +160.0 159982 1.7 POLR2A PKNOX1 BRCA1 CEBPB JUN RCOR1 JUND MAX SP1 MXI1 SNORD74B RPS26P5 piR-59297-422 MIR99AHG
GH21J016317 Enhancer 0.4 Ensembl dbSUPER 11.7 -32.5 -32533 1.8 PRDM1 SNORD74B ENSG00000270071 lnc-USP25-7 MIR99AHG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORD74B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD74B Gene

Genomic Locations for SNORD74B Gene
chr21:16,284,696-16,284,768
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand
chr21:17,657,017-17,657,089
(GRCh37/hg19)
Size:
73 bases
Orientation:
Minus strand

Genomic View for SNORD74B Gene

Genes around SNORD74B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD74B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD74B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD74B Gene

Proteins for SNORD74B Gene

Post-translational modifications for SNORD74B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD74B Gene

Domains & Families for SNORD74B Gene

Gene Families for SNORD74B Gene

genes like me logo Genes that share domains with SNORD74B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORD74B Gene

Function for SNORD74B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD74B Gene

Localization for SNORD74B Gene

Gene Ontology (GO) - Cellular Components for SNORD74B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORD74B: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORD74B Gene

Pathways & Interactions for SNORD74B Gene

PathCards logo

SuperPathways for SNORD74B Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORD74B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORD74B: view

No data available for Pathways by source and SIGNOR curated interactions for SNORD74B Gene

Drugs & Compounds for SNORD74B Gene

No Compound Related Data Available

Transcripts for SNORD74B Gene

mRNA/cDNA for SNORD74B Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) Rfam transcripts :
(1) snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD74B Gene

No ASD Table

Relevant External Links for SNORD74B Gene

GeneLoc Exon Structure for
SNORD74B
ECgene alternative splicing isoforms for
SNORD74B

Expression for SNORD74B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD74B Gene

Orthologs for SNORD74B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD74B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD74 33
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm26224 33
  • 68 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORD74 33
  • 63 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD74 33 33
  • 57 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SNORD74 33
  • 63 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD74 33
  • 60 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORD74 33
  • 64 (a)
OneToMany
Species where no ortholog for SNORD74B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD74B Gene

ENSEMBL:
Gene Tree for SNORD74B (if available)
TreeFam:
Gene Tree for SNORD74B (if available)

Paralogs for SNORD74B Gene

No data available for Paralogs for SNORD74B Gene

Variants for SNORD74B Gene

Sequence variations from dbSNP and Humsavar for SNORD74B Gene

SNP ID Clin Chr 21 pos Variation AA Info Type
rs1000116968 -- 16,284,755(-) G/A non_coding_transcript_variant
rs1000446255 -- 16,284,427(-) C/T downstream_transcript_variant
rs1001072332 -- 16,285,733(-) G/C upstream_transcript_variant
rs1001746057 -- 16,285,451(-) C/T upstream_transcript_variant
rs1002695225 -- 16,286,503(-) C/G upstream_transcript_variant

Additional Variant Information for SNORD74B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD74B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD74B Gene

Disorders for SNORD74B Gene

Additional Disease Information for SNORD74B

No disorders were found for SNORD74B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD74B Gene

Publications for SNORD74B Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 56

No data available for External Links for SNORD74B Gene

Products for SNORD74B Gene

Sources for SNORD74B Gene