Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORD73B Gene

Aliases for SNORD73B Gene

  • Small Nucleolar RNA, C/D Box U73B (Pseudogene) 2 3 5
  • RNA, U73B Small Nucleolar Pseudogene 2 3
  • U73B Small Nucleolar RNA 3
  • U73B SnoRNA 3
  • RNU73B 3
  • U73B 3

External Ids for SNORD73B Gene

Previous HGNC Symbols for SNORD73B Gene

  • RNU73B

Previous GeneCards Identifiers for SNORD73B Gene

  • GC04P152242
  • GC04P152024
  • GC04P152028
  • GC04P152038

Summaries for SNORD73B Gene

GeneCards Summary for SNORD73B Gene

SNORD73B (Small Nucleolar RNA, C/D Box U73B (Pseudogene)) is a Pseudogene.

Additional gene information for SNORD73B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD73B Gene

Genomics for SNORD73B Gene

GeneHancer (GH) Regulatory Elements for SNORD73B Gene

Promoters and enhancers for SNORD73B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J151097 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 650.7 -1.9 -1907 4.5 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 RPS3A SNORD73B GC04P151107 GC04P151106 GC04P151105 GC04P151100 ENSG00000249708 ENSG00000249818 FAM160A1 SH3D19
GH04J151029 Enhancer 1 ENCODE dbSUPER 11.9 -71.9 -71929 0.8 HDGF TAF9B NFRKB BMI1 BATF IRF4 ATF7 IKZF2 RUNX3 CREM RPS3A SNORD73B AK4P6 GC04M151092
GH04J151126 Enhancer 0.3 FANTOM5 12 +25.2 25165 0.3 RXRA SNORD73A SNORD73B ENSG00000270681 LRBA SH3D19
GH04J151125 Enhancer 0.2 FANTOM5 12.1 +24.1 24146 0.3 SNORD73A SNORD73B RPS3A ENSG00000270681 SH3D19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORD73B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD73B Gene

Genomic Locations for SNORD73B Gene
chr4:151,101,957-151,102,231
(GRCh38/hg38)
Size:
275 bases
Orientation:
Plus strand
chr4:152,023,109-152,023,383
(GRCh37/hg19)
Size:
275 bases
Orientation:
Plus strand

Genomic View for SNORD73B Gene

Genes around SNORD73B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD73B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD73B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD73B Gene

Proteins for SNORD73B Gene

Post-translational modifications for SNORD73B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD73B Gene

Domains & Families for SNORD73B Gene

Gene Families for SNORD73B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD73B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD73B Gene

Function for SNORD73B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD73B Gene

Localization for SNORD73B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD73B Gene

Pathways & Interactions for SNORD73B Gene

SuperPathways for SNORD73B Gene

No Data Available

Interacting Proteins for SNORD73B Gene

Gene Ontology (GO) - Biological Process for SNORD73B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD73B Gene

Drugs & Compounds for SNORD73B Gene

No Compound Related Data Available

Transcripts for SNORD73B Gene

mRNA/cDNA for SNORD73B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD73B Gene

No ASD Table

Relevant External Links for SNORD73B Gene

GeneLoc Exon Structure for
SNORD73B
ECgene alternative splicing isoforms for
SNORD73B

Expression for SNORD73B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD73B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD73B Gene:

SNORD73B
genes like me logo Genes that share expression patterns with SNORD73B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD73B Gene

Orthologs for SNORD73B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD73B Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia SNORD73 34
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD73 34
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rnu73b 34
  • 85 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD73 34
  • 77 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD73 34
  • 79 (a)
OneToMany
Species where no ortholog for SNORD73B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD73B Gene

ENSEMBL:
Gene Tree for SNORD73B (if available)
TreeFam:
Gene Tree for SNORD73B (if available)

Paralogs for SNORD73B Gene

No data available for Paralogs for SNORD73B Gene

Variants for SNORD73B Gene

Additional Variant Information for SNORD73B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD73B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD73B Gene

Disorders for SNORD73B Gene

Additional Disease Information for SNORD73B

No disorders were found for SNORD73B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD73B Gene

Publications for SNORD73B Gene

  1. A novel snoRNA (U73) is encoded within the introns of the human and mouse ribosomal protein S3a genes. (PMID: 9573378) Rebane A … Metspalu A (Gene 1998) 2 3 58
  2. The human S3a ribosomal protein: sequence, location and cell-free transcription of the functional gene. (PMID: 8647443) Nolte D … Seifart KH (Gene 1996) 2 3 58
  3. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 3 58
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD73B Gene

Sources for SNORD73B Gene

Content
Loading form....