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Aliases for SNORD63B Gene

Subcategory (RNA class) for SNORD63B Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for SNORD63B Gene

  • Small Nucleolar RNA, C/D Box 63B 2 3 5

External Ids for SNORD63B Gene

Previous GeneCards Identifiers for SNORD63B Gene

  • GC00U936709
  • GC05U902858

Summaries for SNORD63B Gene

GeneCards Summary for SNORD63B Gene

SNORD63B (Small Nucleolar RNA, C/D Box 63B) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for SNORD63B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD63B Gene

Genomics for SNORD63B Gene

GeneHancer (GH) Regulatory Elements for SNORD63B Gene

Promoters and enhancers for SNORD63B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J138438 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 10.9 +119.7 119697 1.9 RB1 ZFP64 SIN3A ZEB1 ZNF335 ZNF23 GLIS2 ZNF366 BCLAF1 EGR2 REEP2 SNORD63B SNORD63 HSPA9 GC05P138442 GC05M138244
GH05J139341 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.2 -783.3 -783276 2.6 MLX DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 SP3 ZNF610 PAIP2 PURA KDM3B RPL7P19 ENSG00000232174 SLC23A1 MZB1 PROB1 MATR3 SNORA74A
GH05J138458 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.6 +99.6 99579 2 ELF3 PKNOX1 MLX ARID4B DNMT3B ZSCAN9 RARA SLC30A9 ATF7 IKZF2 GC05M138244 REEP2 SNORD63B SNORD63 HSPA9 LRRTM2 CDC25C FAM53C FAM13B ETF1
GH05J138578 Enhancer 1 Ensembl ENCODE 11.8 -20.3 -20254 0.8 PKNOX1 CLOCK ZBTB40 RAD21 RFX5 ZNF766 ZNF143 RCOR1 BCLAF1 RUNX3 CTNNA1 ENSG00000238745 SNORD63B LOC105379194 HSPA9 RPL10AP10 LOC105379193
GH05J138461 Enhancer 1 FANTOM5 Ensembl dbSUPER 11.6 +97.6 97602 0.5 USF1 MAX NFYC USF2 PRDM10 PRDM1 NFKBIZ GC05M138244 REEP2 SNORD63 SNORD63B HSPA9 FAM53C ETF1 EGR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD63B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD63B Gene

Genomic Locations for SNORD63B Gene
chr5:138,558,970-138,559,039
(GRCh38/hg38)
Size:
70 bases
Orientation:
Minus strand
chr5:137,894,659-137,894,728
(GRCh37/hg19)
Size:
70 bases
Orientation:
Minus strand

Genomic View for SNORD63B Gene

Genes around SNORD63B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD63B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD63B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD63B Gene

Proteins for SNORD63B Gene

Post-translational modifications for SNORD63B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD63B Gene

Domains & Families for SNORD63B Gene

Gene Families for SNORD63B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD63B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD63B Gene

Function for SNORD63B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD63B Gene

Localization for SNORD63B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD63B Gene

Pathways & Interactions for SNORD63B Gene

SuperPathways for SNORD63B Gene

No Data Available

Interacting Proteins for SNORD63B Gene

Gene Ontology (GO) - Biological Process for SNORD63B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD63B Gene

Drugs & Compounds for SNORD63B Gene

No Compound Related Data Available

Transcripts for SNORD63B Gene

mRNA/cDNA for SNORD63B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD63B Gene

No ASD Table

Relevant External Links for SNORD63B Gene

GeneLoc Exon Structure for
SNORD63B
ECgene alternative splicing isoforms for
SNORD63B

Expression for SNORD63B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD63B Gene

Orthologs for SNORD63B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD63B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD63 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD63 34
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22200 34
  • 82 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia SNORD63 34
  • 74 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD63 34
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD63 34
  • 60 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD63 34
  • 68 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii SNORD63 34
  • 63 (a)
OneToMany
Species where no ortholog for SNORD63B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD63B Gene

ENSEMBL:
Gene Tree for SNORD63B (if available)
TreeFam:
Gene Tree for SNORD63B (if available)

Paralogs for SNORD63B Gene

No data available for Paralogs for SNORD63B Gene

Variants for SNORD63B Gene

Additional Variant Information for SNORD63B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD63B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD63B Gene

Disorders for SNORD63B Gene

Additional Disease Information for SNORD63B

No disorders were found for SNORD63B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD63B Gene

Publications for SNORD63B Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 58

Products for SNORD63B Gene

Sources for SNORD63B Gene

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