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Aliases for SNORD51 Gene

Subcategory (RNA class) for SNORD51 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD51 Gene

  • Small Nucleolar RNA, C/D Box 51 2 3 5
  • RNA, U51 Small Nuclear 2 3
  • C/D Box SnoRNA U51 3
  • RNU51 3
  • U51 3

External Ids for SNORD51 Gene

Previous HGNC Symbols for SNORD51 Gene

  • RNU51

Previous GeneCards Identifiers for SNORD51 Gene

  • GC02P206734
  • GC02P207026
  • GC02P198875

Summaries for SNORD51 Gene

GeneCards Summary for SNORD51 Gene

SNORD51 (Small Nucleolar RNA, C/D Box 51) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD51 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD51 Gene

Genomics for SNORD51 Gene

GeneHancer (GH) Regulatory Elements for SNORD51 Gene

Promoters and enhancers for SNORD51 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I206081 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 10.7 -77.4 -77440 6.7 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B ZNF207 ZNF143 ENSG00000227946 INO80D NDUFS1 GCSHP3 ENSG00000231955 SNORD51 SNORA41 EEF1B2 ZDBF2 GPR1
GH02I206077 Enhancer 0.7 ENCODE dbSUPER 11.2 -83.9 -83897 0.7 FOXA2 NFIA TEAD1 FOXA3 CEBPA ZNF384 GCSHP3 ENSG00000231955 EEF1B2 NDUFS1 SNORA41 SNORD51 ENSG00000225610 INO80D ENSG00000227946 RPL27P8
GH02I206078 Enhancer 0.7 ENCODE dbSUPER 11.2 -82.2 -82228 1.7 SP1 SOX13 SP5 POLR2A TEAD3 NDUFS1 GCSHP3 ENSG00000231955 EEF1B2 SNORA41 SNORD51 ENSG00000225610 GPR1 ENSG00000227946 INO80D
GH02I206250 Enhancer 0.6 Ensembl ENCODE 10.7 +88.6 88620 0.6 CTCF POLR2A RAD21 ZDBF2 RN7SKP200 GPR1 SNORA41 EEF1B2 SNORD51 NDUFS1 HMGN1P6 LOC100132849 GPR1-AS
GH02I206092 Enhancer 0.4 ENCODE dbSUPER 10.6 -69.3 -69311 1 ENSG00000231955 GCSHP3 NDUFS1 SNORA41 SNORD51 EEF1B2 GPR1 GC02M206089 GC02M206102
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD51 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD51 gene promoter:

Genomic Locations for SNORD51 Gene

Genomic Locations for SNORD51 Gene
chr2:206,161,878-206,161,957
(GRCh38/hg38)
Size:
80 bases
Orientation:
Plus strand
chr2:207,026,602-207,026,681
(GRCh37/hg19)

Genomic View for SNORD51 Gene

Genes around SNORD51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD51 Gene

Proteins for SNORD51 Gene

Post-translational modifications for SNORD51 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD51 Gene

Domains & Families for SNORD51 Gene

Gene Families for SNORD51 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD51: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD51 Gene

Function for SNORD51 Gene

Phenotypes From GWAS Catalog for SNORD51 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD51 Gene

Localization for SNORD51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD51 Gene

Pathways & Interactions for SNORD51 Gene

SuperPathways for SNORD51 Gene

No Data Available

Interacting Proteins for SNORD51 Gene

Gene Ontology (GO) - Biological Process for SNORD51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD51 Gene

Drugs & Compounds for SNORD51 Gene

No Compound Related Data Available

Transcripts for SNORD51 Gene

mRNA/cDNA for SNORD51 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD51 Gene

No ASD Table

Relevant External Links for SNORD51 Gene

GeneLoc Exon Structure for
SNORD51
ECgene alternative splicing isoforms for
SNORD51

Expression for SNORD51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD51 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD51 Gene:

SNORD51
genes like me logo Genes that share expression patterns with SNORD51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD51 Gene

Orthologs for SNORD51 Gene

Evolution for SNORD51 Gene

ENSEMBL:
Gene Tree for SNORD51 (if available)
TreeFam:
Gene Tree for SNORD51 (if available)

No data available for Orthologs for SNORD51 Gene

Paralogs for SNORD51 Gene

No data available for Paralogs for SNORD51 Gene

Variants for SNORD51 Gene

Sequence variations from dbSNP and Humsavar for SNORD51 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1002736599 -- 206,160,853(+) A/G upstream_transcript_variant
rs1003365375 -- 206,160,478(+) C/T upstream_transcript_variant
rs1004150430 -- 206,162,413(+) T/C downstream_transcript_variant
rs1004945256 -- 206,160,298(+) C/A upstream_transcript_variant
rs1005297030 -- 206,159,887(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD51 Gene

Variant ID Type Subtype PubMed ID
nsv963768 CNV duplication 23825009

Additional Variant Information for SNORD51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD51 Gene

Disorders for SNORD51 Gene

Additional Disease Information for SNORD51

No disorders were found for SNORD51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD51 Gene

Publications for SNORD51 Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-László Z … Kiss T (Cell 1996) 2 3 58
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD51 Gene

Sources for SNORD51 Gene

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