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Aliases for SNORD41 Gene

Subcategory (RNA class) for SNORD41 Gene


Quality Score for this RNA gene is


Aliases for SNORD41 Gene

  • Small Nucleolar RNA, C/D Box 41 2 3 5
  • RNA, U41 Small Nuclear 2 3
  • RNU41 3
  • U41 3

External Ids for SNORD41 Gene

Previous HGNC Symbols for SNORD41 Gene

  • RNU41

Previous GeneCards Identifiers for SNORD41 Gene

  • GC19M012679
  • GC19M012817
  • GC19M012390

Summaries for SNORD41 Gene

GeneCards Summary for SNORD41 Gene

SNORD41 (Small Nucleolar RNA, C/D Box 41) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD41 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD41 Gene

Genomics for SNORD41 Gene

GeneHancer (GH) Regulatory Elements for SNORD41 Gene

Top Transcription factor binding sites by QIAGEN in the SNORD41 gene promoter:
  • Arnt
  • c-Ets-1
  • CREB
  • E47
  • Egr-4
  • Evi-1
  • LCR-F1
  • p53
  • Pax-3
  • Tal-1

Genomic Locations for SNORD41 Gene

Genomic Locations for SNORD41 Gene
70 bases
Minus strand
70 bases
Minus strand

Genomic View for SNORD41 Gene

Genes around SNORD41 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD41 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD41 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD41 Gene

Proteins for SNORD41 Gene

Post-translational modifications for SNORD41 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD41 Gene

Domains & Families for SNORD41 Gene

Gene Families for SNORD41 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD41: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD41 Gene

Function for SNORD41 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD41 Gene

Localization for SNORD41 Gene

Gene Ontology (GO) - Cellular Components for SNORD41 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORD41: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for SNORD41 Gene

Pathways & Interactions for SNORD41 Gene

PathCards logo

SuperPathways for SNORD41 Gene

No Data Available

Interacting Proteins for SNORD41 Gene

Gene Ontology (GO) - Biological Process for SNORD41 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORD41: view

No data available for Pathways by source and SIGNOR curated interactions for SNORD41 Gene

Drugs & Compounds for SNORD41 Gene

No Compound Related Data Available

Transcripts for SNORD41 Gene

mRNA/cDNA for SNORD41 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD41 Gene

No ASD Table

Relevant External Links for SNORD41 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD41 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD41 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD41 Gene:

genes like me logo Genes that share expression patterns with SNORD41: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD41 Gene

Orthologs for SNORD41 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD41 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD41 35
  • 100 (a)
(Mus musculus)
Mammalia Gm25506 35
  • 79 (a)
(Bos Taurus)
Mammalia SNORD41 35
  • 77 (a)
(Canis familiaris)
Mammalia SNORD41 35
  • 77 (a)
(Monodelphis domestica)
Mammalia SNORD41 35
  • 67 (a)
(Anolis carolinensis)
Reptilia SNORD41 35
  • 72 (a)
Species where no ortholog for SNORD41 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD41 Gene

Gene Tree for SNORD41 (if available)
Gene Tree for SNORD41 (if available)

Paralogs for SNORD41 Gene

No data available for Paralogs for SNORD41 Gene

Variants for SNORD41 Gene

Sequence variations from dbSNP and Humsavar for SNORD41 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1003412229 -- 12,707,263(-) C/T upstream_transcript_variant
rs1005087699 -- 12,708,285(-) C/G upstream_transcript_variant
rs1005682447 -- 12,706,012(-) C/A/T downstream_transcript_variant
rs1007185627 -- 12,706,877(-) A/G/T upstream_transcript_variant
rs1008888364 -- 12,707,979(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD41 Gene

Variant ID Type Subtype PubMed ID
dgv138n111 CNV deletion 26073780
nsv1160586 CNV duplication 26073780
nsv953977 CNV deletion 24416366

Additional Variant Information for SNORD41 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD41 Gene

Disorders for SNORD41 Gene

Additional Disease Information for SNORD41

No disorders were found for SNORD41 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD41 Gene

Publications for SNORD41 Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-László Z … Kiss T (Cell 1996) 2 3 58
  2. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 58
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD41 Gene

Sources for SNORD41 Gene

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