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Aliases for SNORD31B Gene

Subcategory (RNA class) for SNORD31B Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORD31B Gene

  • Small Nucleolar RNA, C/D Box 31B 2 3 5

External Ids for SNORD31B Gene

ORGUL Members for SNORD31B Gene

Previous GeneCards Identifiers for SNORD31B Gene

  • GC00U936744
  • GC13U901523

Summaries for SNORD31B Gene

GeneCards Summary for SNORD31B Gene

SNORD31B (Small Nucleolar RNA, C/D Box 31B) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD31B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD31B Gene

Genomics for SNORD31B Gene

GeneHancer (GH) Regulatory Elements for SNORD31B Gene

Promoters and enhancers for SNORD31B Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J107369 Enhancer 0.7 ENCODE dbSUPER 11.4 -49.6 -49629 1.7 JUND JUN FOS MYC SNORD31B MIR1267 GC13M107322 PIR34139 FAM155A
GH13J107258 Enhancer 0.4 ENCODE 11.2 +62.1 62065 0.2 JUN FOS SNORD31B GC13M107322 GC13P107186 FAM155A
GH13J107348 Enhancer 0.6 ENCODE dbSUPER 0.3 -28.2 -28181 0.6 RCOR1 CHD2 GC13M107322 SNORD31B PIR34139 FAM155A
GH13J107373 Enhancer 0.8 ENCODE dbSUPER 0.2 -52.8 -52815 0.2 CTCF JUND GATA3 POLR2A JUN MAX FOS RAD21 GC13M107322 SNORD31B PIR34139 FAM155A
GH13J107364 Enhancer 0.5 ENCODE dbSUPER 0.3 -44.4 -44428 1.7 FOS SNORD31B GC13M107322 PIR34139 FAM155A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD31B on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD31B Gene

Genomic Locations for SNORD31B Gene
chr13:107,320,895-107,320,963
(GRCh38/hg38)
Size:
69 bases
Orientation:
Minus strand
chr13:107,973,243-107,973,311
(GRCh37/hg19)
Size:
69 bases
Orientation:
Minus strand

Genomic View for SNORD31B Gene

Genes around SNORD31B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD31B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD31B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD31B Gene

Proteins for SNORD31B Gene

Post-translational modifications for SNORD31B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD31B Gene

Domains & Families for SNORD31B Gene

Gene Families for SNORD31B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD31B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD31B Gene

Function for SNORD31B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD31B Gene

Localization for SNORD31B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD31B Gene

Pathways & Interactions for SNORD31B Gene

SuperPathways for SNORD31B Gene

No Data Available

Interacting Proteins for SNORD31B Gene

Gene Ontology (GO) - Biological Process for SNORD31B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD31B Gene

Drugs & Compounds for SNORD31B Gene

No Compound Related Data Available

Transcripts for SNORD31B Gene

mRNA/cDNA for SNORD31B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD31B Gene

No ASD Table

Relevant External Links for SNORD31B Gene

GeneLoc Exon Structure for
SNORD31B
ECgene alternative splicing isoforms for
SNORD31B

Expression for SNORD31B Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD31B Gene

Orthologs for SNORD31B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD31B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD31 34
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD31 34
  • 85 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORD31 34
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23246 34
  • 78 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD31 34
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD31 34 34
  • 72 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD31 34
  • 63 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD31 34 34
  • 59 (a)
OneToMany
wu:fc55g01 34
  • 55 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD31 34
  • 60 (a)
OneToOne
Species where no ortholog for SNORD31B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD31B Gene

ENSEMBL:
Gene Tree for SNORD31B (if available)
TreeFam:
Gene Tree for SNORD31B (if available)

Paralogs for SNORD31B Gene

No data available for Paralogs for SNORD31B Gene

Variants for SNORD31B Gene

Additional Variant Information for SNORD31B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD31B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD31B Gene

Disorders for SNORD31B Gene

Additional Disease Information for SNORD31B

No disorders were found for SNORD31B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD31B Gene

Publications for SNORD31B Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 58

Products for SNORD31B Gene

Sources for SNORD31B Gene

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