Aliases for SNORD26 Gene

Data sources for SNORD26 Gene:

RNA type for SNORD26 Gene


Aliases for SNORD26 Gene

External Ids for SNORD26 Gene

Previous HGNC Symbols for SNORD26 Gene

  • RNU26

Previous GeneCards Identifiers for SNORD26 Gene

  • GC11M062399
  • GC11M062407
  • GC11M062417
  • GC11M062426
  • GC11M062630
  • GC11M062635
  • GC11M058956
  • GC11M062641
  • GC11M062649
  • GC11M062654
  • GC11M062660
  • GC11M062671
  • GC11M062860
  • GC11M062870
  • GC11M062977
  • GC11M063001
  • GC11M063028
  • GC11M063093
  • GC11M062879
  • GC11M062890
  • GC11M062899
  • GC11M062908
  • GC11M062917
  • GC11M062926
  • GC11M062930
  • GC11M062949
  • GC11M063458
  • GC11M063905

Summaries for SNORD26 Gene

GeneCards Summary for SNORD26 Gene

SNORD26 (Small Nucleolar RNA, C/D Box 26) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD26 include Non-Syndromic X-Linked Intellectual Disability.

Rfam classification for SNORD26 Gene

  • Small nucleolar RNA SNORD26

Additional gene information for SNORD26 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORD26 Gene

Genomics for SNORD26 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNORD26 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J062851 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.4 -2394 13.4 BCLAF1 SP1 ZNF207 ZNF654 ZNF600 NCOR1 IKZF1 MYC ZNF580 ZNF592 SNHG1 NXF1 SLC3A2 SNORD25 piR-40154-030 piR-40163-016 piR-52261-046 CSKMT MTA2 STX5-DT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORD26 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the SNORD26 gene promoter:
  • AP-1
  • ATF-2
  • c-Jun
  • SREBP-1b
  • SREBP-1c

Genomic Locations for SNORD26 Gene

Latest Assembly
75 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
75 bases
Minus strand

Genomic View for SNORD26 Gene

Genes around SNORD26 on UCSC Golden Path with GeneCards custom track
SNORD26 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
SNORD26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD26 Gene

Proteins for SNORD26 Gene

Post-translational modifications for SNORD26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD26 Gene

Domains & Families for SNORD26 Gene

Gene Families for SNORD26 Gene

genes like me logo Genes that share domains with SNORD26: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORD26 Gene

Function for SNORD26 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD26 Gene

Localization for SNORD26 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SNORD26 gene
Compartment Confidence
nucleus 1

Gene Ontology (GO) - Cellular Components for SNORD26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORD26: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for SNORD26 Gene

Pathways & Interactions for SNORD26 Gene

PathCards logo

SuperPathways for SNORD26 Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORD26 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORD26: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORD26 Gene

Drugs & Compounds for SNORD26 Gene

No Compound Related Data Available

Transcripts for SNORD26 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SNORD26 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000197BB5_9606 snoRNA 75 6

RefSeq: NR_002564,

Ensembl: ENST00000384147 (view in UCSC) ,

Rfam: RF00087,

snoDB: SNODB63,

snOPY: Homo_sapiens300168,

ENA: U40580.1:1015..1089:ncRNA,

URS0001BC1D16_9606 snoRNA 75 1

Rfam: RF00087,

SNORD26 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD26 Gene

No ASD Table

Relevant External Links for SNORD26 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for SNORD26 Gene

Expression for SNORD26 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SNORD26

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD26 Gene

Orthologs for SNORD26 Gene

Evolution for SNORD26 Gene

Gene Tree for SNORD26 (if available)
Gene Tree for SNORD26 (if available)
Alliance of Genome Resources:
Additional Orthologs for SNORD26

No data available for Orthologs for SNORD26 Gene

Paralogs for SNORD26 Gene

No data available for Paralogs for SNORD26 Gene

Variants for SNORD26 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for SNORD26 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for SNORD26 Gene

Variant ID Type Subtype PubMed ID
nsv1159903 CNV duplication 26073780
nsv508636 CNV deletion 20534489
nsv509416 CNV insertion 20534489

Additional Variant Information for SNORD26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNORD26 Gene

Disorders for SNORD26 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNORD26 Gene - From: COP

Disorder Aliases PubMed IDs
non-syndromic x-linked intellectual disability
  • non-specific x-linked mental retardation
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for SNORD26

genes like me logo Genes that share disorders with SNORD26: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNORD26 Gene

Publications for SNORD26 Gene

  1. A mammalian gene with introns instead of exons generating stable RNA products. (PMID: 8559254) Tycowski KT … Steitz JA (Nature 1996) 2 3
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3
  3. TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions. (PMID: 27609421) Banks CA … Washburn MP (Molecular & cellular proteomics : MCP 2016) 3
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3
  5. The U22 host gene (UHG): chromosomal localization of UHG and distribution of U22 small nucleolar RNA. (PMID: 9387929) Frey MR … Matera AG (Histochemistry and cell biology 1997) 3

Products for SNORD26 Gene

Sources for SNORD26 Gene