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Aliases for SNORD22 Gene

Subcategory (RNA class) for SNORD22 Gene


Quality Score for this RNA gene is


Aliases for SNORD22 Gene

  • Small Nucleolar RNA, C/D Box 22 2 3 5
  • RNA, U22 Small Nucleolar 2 3
  • RNU22 3
  • U22 3

External Ids for SNORD22 Gene

ORGUL Members for SNORD22 Gene

Previous HGNC Symbols for SNORD22 Gene

  • RNU22

Previous GeneCards Identifiers for SNORD22 Gene

  • GC11M062393
  • GC11M062401
  • GC11M062411
  • GC11M062420
  • GC11M062621
  • GC11M058949
  • GC11M062664
  • GC11M062856
  • GC11M062865
  • GC11M062873
  • GC11M062881
  • GC11M062889
  • GC11M062897
  • GC11M062905
  • GC11M062913

Summaries for SNORD22 Gene

GeneCards Summary for SNORD22 Gene

SNORD22 (Small Nucleolar RNA, C/D Box 22) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD22 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD22 Gene

Genomics for SNORD22 Gene

GeneHancer (GH) Regulatory Elements for SNORD22 Gene

Promoters and enhancers for SNORD22 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J062851 Enhancer 1.1 Ensembl ENCODE 650.7 +1.2 1178 1.6 HNRNPUL1 PKNOX1 SMAD1 FOXA2 ARNT TCF12 POLR2B E2F8 PAF1 REST GC11M062933 GC11M062936 SNORD22 SNORD31 SNORD30 GC11M062932 SNHG1 NXF1 UBXN1 CSKMT
GH11J062878 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.9 -28.8 -28798 5.9 CLOCK DMAP1 YY1 ZNF213 ZNF143 SP3 MEF2D SSRP1 GLIS1 NBN SLC3A2 SNHG1 CSKMT TAF6L GANAB NXF1 TTC9C EML3 STX5 INTS5
GH11J062887 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.7 -36.7 -36724 4 PKNOX1 SMAD1 FOXA2 MLX ARID4B SIN3A DMAP1 TCF12 ZNF121 POLR2B BSCL2 TAF6L SNHG1 TUT1 TTC9C LOC105369332 MTA2 CSKMT SLC3A2 SNORD28
GH11J062712 Promoter/Enhancer 1.4 EPDnew ENCODE dbSUPER 10.2 +139.1 139109 3.5 FOXA2 MAX RAD21 YY1 FOSL1 ZNF316 HNF4G CBFA2T2 ZNF600 NFE2 PIR38618 HNRNPUL2 TTC9C UBXN1 LBHD1 LRRN4CL POLR2G GANAB B3GAT3 UQCC3
GH11J062694 Enhancer 0.7 ENCODE 10.5 +158.2 158170 1.1 MEIS2 CTCF RB1 BACH1 SIN3A RAD21 CC2D1A POLR2A EGR1 ARID2 BSCL2 TTC9C LBHD1 ENSG00000255432 CSKMT SNORA57 INTS5 GANAB UQCC3 EML3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD22 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD22 gene promoter:
  • AP-1
  • c-Jun
  • ATF-2
  • SREBP-1c
  • SREBP-1b

Genomic Locations for SNORD22 Gene

Genomic Locations for SNORD22 Gene
126 bases
Minus strand
3,927 bases
Minus strand

Genomic View for SNORD22 Gene

Genes around SNORD22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD22 Gene

Proteins for SNORD22 Gene

Post-translational modifications for SNORD22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD22 Gene

Domains & Families for SNORD22 Gene

Gene Families for SNORD22 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD22: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD22 Gene

Function for SNORD22 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD22 Gene

Localization for SNORD22 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SNORD22 gene
Compartment Confidence
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD22 Gene

Pathways & Interactions for SNORD22 Gene

SuperPathways for SNORD22 Gene

No Data Available

Interacting Proteins for SNORD22 Gene

Gene Ontology (GO) - Biological Process for SNORD22 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD22 Gene

Drugs & Compounds for SNORD22 Gene

No Compound Related Data Available

Transcripts for SNORD22 Gene

mRNA/cDNA for SNORD22 Gene

(1) Additional mRNA sequences :
(522) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(2) RNA Central transcripts :

Unigene Clusters for SNORD22 Gene

Small nucleolar RNA, C/D box 22:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD22 Gene

No ASD Table

Relevant External Links for SNORD22 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD22 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD22 Gene:


SOURCE GeneReport for Unigene cluster for SNORD22 Gene:

genes like me logo Genes that share expression patterns with SNORD22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD22 Gene

Orthologs for SNORD22 Gene

Evolution for SNORD22 Gene

Gene Tree for SNORD22 (if available)
Gene Tree for SNORD22 (if available)

No data available for Orthologs for SNORD22 Gene

Paralogs for SNORD22 Gene

No data available for Paralogs for SNORD22 Gene

Variants for SNORD22 Gene

Sequence variations from dbSNP and Humsavar for SNORD22 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1003373675 -- 62,852,614(-) G/A downstream_transcript_variant
rs1003457092 -- 62,853,276(-) C/G upstream_transcript_variant
rs1003477388 -- 62,853,524(-) T/C upstream_transcript_variant
rs1005826803 -- 62,854,068(-) A/C upstream_transcript_variant
rs1006912266 -- 62,853,601(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD22 Gene

Variant ID Type Subtype PubMed ID
nsv509416 CNV insertion 20534489
nsv508636 CNV deletion 20534489
nsv1159903 CNV duplication 26073780

Additional Variant Information for SNORD22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD22 Gene

Disorders for SNORD22 Gene

Additional Disease Information for SNORD22

No disorders were found for SNORD22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD22 Gene

Publications for SNORD22 Gene

  1. The U22 host gene (UHG): chromosomal localization of UHG and distribution of U22 small nucleolar RNA. (PMID: 9387929) Frey MR … Matera AG (Histochemistry and cell biology 1997) 2 3 22 58
  2. A mammalian gene with introns instead of exons generating stable RNA products. (PMID: 8559254) Tycowski KT … Steitz JA (Nature 1996) 2 3 22 58
  3. Requirement for intron-encoded U22 small nucleolar RNA in 18S ribosomal RNA maturation. (PMID: 7985025) Tycowski KT … Steitz JA (Science (New York, N.Y.) 1994) 3 22 58
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A … Hentze MW (Cell 2012) 3 58
  5. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD22 Gene

Sources for SNORD22 Gene

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