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SNORD1C (Small Nucleolar RNA, C/D Box 1C) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD1C include Bleeding Disorder, Platelet-Type, 11 and Amegakaryocytic Thrombocytopenia, Congenital.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH17J076555 | Promoter/Enhancer | 2.1 | EPDnew Ensembl ENCODE CraniofacialAtlas | 600.7 | +0.7 | 668 | 8.1 | BRCA1 ARHGAP35 HNRNPL CREB1 CTCF ATF7 PRDM10 ZNF629 TFE3 RFX1 | ENSG00000267546 CYGB SNORD1B SNORD1C piR-36494 piR-61919 ENSG00000267543 SNHG16 SRSF2 UNK |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005730 | nucleolus | IEA | -- |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS0000686085_9606 | snoRNA | 78 | 4 |
Ensembl: ENST00000363315 (view in UCSC) , Rfam: RF00213, snoDB: SNODB632, snOPY: Homo_sapiens300714, |
URS0000ABD829_9606 | snoRNA | 80 | 3 |
HGNC: 32677, RefSeq: NR_004397, snoDB: SNODB1525, |
URS00005B71F6_9606 | snoRNA | 80 | 1 |
ENA: AJ543326.1:1..80:ncRNA, |
URS000072497E_9606 | snoRNA | 77 | 1 |
Rfam: RF00213, |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
esv3641290 | CNV | gain | 21293372 |
esv3641291 | CNV | gain | 21293372 |
nsv828107 | CNV | loss | 20364138 |
Disorder | Aliases | PubMed IDs |
---|---|---|
bleeding disorder, platelet-type, 11 |
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amegakaryocytic thrombocytopenia, congenital |
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