Aliases for SNORD14E Gene

Subcategory (RNA class) for SNORD14E Gene

snoRNA

Number of RNA Genes sources:

2 / 17

Aliases for SNORD14E Gene

  • Small Nucleolar RNA, C/D Box 14E 2 3 5
  • SNORD14E 2 5
  • RNA, Small Nucleolar 3
  • AP000926.6 170
  • SNODB1343 177
  • SNODB1791 177
  • SnoRNA 3

External Ids for SNORD14E Gene

Previous GeneCards Identifiers for SNORD14E Gene

  • GC11M122469
  • GC11M122931
  • GC11M122935
  • GC11M118871
  • GC11M122939
  • GC11M122944
  • GC11M122955
  • GC11M122965
  • GC11M122978

Summaries for SNORD14E Gene

GeneCards Summary for SNORD14E Gene

SNORD14E (Small Nucleolar RNA, C/D Box 14E) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD14E Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for SNORD14E Gene

Genomics for SNORD14E Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNORD14E Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J123033 Enhancer 0.4 Ensembl 13.1 +23.0 22965 2.8 CTCF RAD21 MAX RPL34P23 lnc-JHY-3 SNORD14E JHY BSX RNU4-23P CRTAM lnc-JHY-2 HSPA8
GH11J123030 Enhancer 0.3 Ensembl 12.6 +27.7 27660 1 HLF SNORD14E BSX JHY RNU4-23P CRTAM RPL34P23 lnc-JHY-2 HSPA8
GH11J123055 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -3.0 -2951 10.9 CEBPG SP1 HNRNPL CREB1 PRDM10 REST RFX1 LEF1 NFKBIZ ZNF692 ENSG00000288061 HSPA8 LOC101929289 SNORD14C lnc-CLMP-3 piR-59038 piR-61486 ZNF202 CLMP JHY
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORD14E on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for SNORD14E Gene

Genomic Locations for SNORD14E Gene
chr11:123,058,077-123,058,161
(GRCh38/hg38)
Size:
85 bases
Orientation:
Minus strand
chr11:122,928,785-122,928,869
(GRCh37/hg19)
Size:
85 bases
Orientation:
Minus strand

Genomic View for SNORD14E Gene

Genes around SNORD14E on UCSC Golden Path with GeneCards custom track
SNORD14E in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
SNORD14E Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD14E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD14E Gene

Proteins for SNORD14E Gene

Post-translational modifications for SNORD14E Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD14E Gene

Domains & Families for SNORD14E Gene

Gene Families for SNORD14E Gene

genes like me logo Genes that share domains with SNORD14E: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORD14E Gene

Function for SNORD14E Gene

Phenotypes From GWAS Catalog for SNORD14E Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD14E Gene

Localization for SNORD14E Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD14E Gene

Pathways & Interactions for SNORD14E Gene

PathCards logo

SuperPathways for SNORD14E Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORD14E Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORD14E Gene

Drugs & Compounds for SNORD14E Gene

No Compound Related Data Available

Transcripts for SNORD14E Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SNORD14E Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000081501D_9606 snoRNA 85 4

HGNC: 30354,

Ensembl: ENST00000364009 (view in UCSC) ,

snoDB: SNODB1791,

snOPY: Homo_sapiens300753,

URS000075DB88_9606 snoRNA 80 2

RefSeq: NR_003125,

snoDB: SNODB1343,

SNORD14E in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD14E Gene

No ASD Table

Relevant External Links for SNORD14E Gene

GeneLoc Exon Structure for
SNORD14E

No data available for mRNA/cDNA for SNORD14E Gene

Expression for SNORD14E Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORD14E Gene

mRNA differential expression in normal tissues according to GTEx for SNORD14E Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.4).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SNORD14E

genes like me logo Genes that share expression patterns with SNORD14E: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD14E Gene

Orthologs for SNORD14E Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD14E Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia SNORD14 31 31
  • 95 (a)
OneToMany
Cow
(Bos Taurus)
Mammalia SNORD14 31
  • 93 (a)
OneToOne
Dog
(Canis familiaris)
Mammalia SNORD14 31
  • 89 (a)
OneToOne
Mouse
(Mus musculus)
Mammalia Snord14e 31
  • 79 (a)
OneToOne
Platypus
(Ornithorhynchus anatinus)
Mammalia SNORD14 31
  • 74 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia SNORD14 31
  • 72 (a)
OneToOne
Chicken
(Gallus gallus)
Aves SNORD14 31
  • 69 (a)
ManyToMany
Lizard
(Anolis carolinensis)
Reptilia SNORD14 31
  • 71 (a)
OneToOne
Zebrafish
(Danio rerio)
Actinopterygii SNORD14 31 31
  • 64 (a)
OneToMany
Sea Squirt
(Ciona savignyi)
Ascidiacea SNORD14 31
  • 41 (a)
OneToMany
Species where no ortholog for SNORD14E was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for SNORD14E Gene

ENSEMBL:
Gene Tree for SNORD14E (if available)
TreeFam:
Gene Tree for SNORD14E (if available)

Paralogs for SNORD14E Gene

No data available for Paralogs for SNORD14E Gene

Variants for SNORD14E Gene

Additional dbSNP identifiers (rs#s) for SNORD14E Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD14E Gene

Variant ID Type Subtype PubMed ID
nsv1039284 CNV gain 25217958
nsv983069 CNV duplication 23825009

Additional Variant Information for SNORD14E Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD14E

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNORD14E Gene

Disorders for SNORD14E Gene

Additional Disease Information for SNORD14E

No disorders were found for SNORD14E Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD14E Gene

Publications for SNORD14E Gene

  1. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. (PMID: 2251119) Liu J … Maxwell ES (Nucleic acids research 1990) 2 3
  2. Structure and expression of a human gene coding for a 71 kd heat shock 'cognate' protein. (PMID: 3037489) Dworniczak B … Mirault ME (Nucleic acids research 1987) 2 3
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3
  4. Phylogenetic analysis of the stress-70 protein family. (PMID: 7545947) Rensing SA … Maier UG (Journal of molecular evolution 1994) 3

Products for SNORD14E Gene

Sources for SNORD14E Gene