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Aliases for SNORD14D Gene

Subcategory (RNA class) for SNORD14D Gene

snoRNA

Quality Score for this RNA gene is

13

Aliases for SNORD14D Gene

  • Small Nucleolar RNA, C/D Box 14D 2 3 5
  • RNA, Small Nucleolar 3
  • SnoRNA 3

External Ids for SNORD14D Gene

ORGUL Members for SNORD14D Gene

Previous GeneCards Identifiers for SNORD14D Gene

  • GC11M122470
  • GC11M122932
  • GC11M122936
  • GC11M118872
  • GC11M122940
  • GC11M122945
  • GC11M122956
  • GC11M122966
  • GC11M122979
  • GC11M123059
  • GC11M123061
  • GC11M123065
  • GC11M123071
  • GC11M123075
  • GC11M123079
  • GC11M123083
  • GC11M123087

Summaries for SNORD14D Gene

GeneCards Summary for SNORD14D Gene

SNORD14D (Small Nucleolar RNA, C/D Box 14D) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD14D Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD14D Gene

Genomics for SNORD14D Gene

GeneHancer (GH) Regulatory Elements for SNORD14D Gene

Promoters and enhancers for SNORD14D Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J123055 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.7 -2.1 -2117 10.9 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 GC11M123095 GC11M123100 HSPA8 LOC101929289 PIR56485 SNORD14C PIR53037 ZNF202 CLMP GC11M123097
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD14D on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD14D Gene

Genomic Locations for SNORD14D Gene
chr11:123,058,909-123,058,995
(GRCh38/hg38)
Size:
87 bases
Orientation:
Minus strand
chr11:122,929,617-122,929,703
(GRCh37/hg19)
Size:
87 bases
Orientation:
Minus strand

Genomic View for SNORD14D Gene

Genes around SNORD14D on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD14D Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD14D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD14D Gene

Proteins for SNORD14D Gene

Post-translational modifications for SNORD14D Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD14D Gene

Domains & Families for SNORD14D Gene

Gene Families for SNORD14D Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD14D: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD14D Gene

Function for SNORD14D Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD14D Gene

Localization for SNORD14D Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD14D Gene

Pathways & Interactions for SNORD14D Gene

SuperPathways for SNORD14D Gene

No Data Available

Interacting Proteins for SNORD14D Gene

Gene Ontology (GO) - Biological Process for SNORD14D Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD14D Gene

Drugs & Compounds for SNORD14D Gene

No Compound Related Data Available

Transcripts for SNORD14D Gene

mRNA/cDNA for SNORD14D Gene

(2778) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD14D Gene

No ASD Table

Relevant External Links for SNORD14D Gene

GeneLoc Exon Structure for
SNORD14D
ECgene alternative splicing isoforms for
SNORD14D

Expression for SNORD14D Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD14D Gene

mRNA differential expression in normal tissues according to GTEx for SNORD14D Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of SNORD14D Gene:

SNORD14D
genes like me logo Genes that share expression patterns with SNORD14D: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD14D Gene

Orthologs for SNORD14D Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD14D Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD14 34
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord14d 34
  • 92 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD14 34
  • 90 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD14 34
  • 81 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD14 34
  • 78 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD14 34
  • 73 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD14 34
  • 71 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD14 34
  • 76 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea SNORD14 34
  • 47 (a)
OneToMany
Species where no ortholog for SNORD14D was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD14D Gene

ENSEMBL:
Gene Tree for SNORD14D (if available)
TreeFam:
Gene Tree for SNORD14D (if available)

Paralogs for SNORD14D Gene

No data available for Paralogs for SNORD14D Gene

Variants for SNORD14D Gene

Sequence variations from dbSNP and Humsavar for SNORD14D Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000333769 -- 123,059,644(-) C/T upstream_transcript_variant
rs1001112689 -- 123,058,554(-) G/C downstream_transcript_variant
rs1003257093 -- 123,059,809(-) G/A upstream_transcript_variant
rs1007823799 -- 123,060,450(-) G/A upstream_transcript_variant
rs1011565931 -- 123,060,914(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD14D Gene

Variant ID Type Subtype PubMed ID
nsv983069 CNV duplication 23825009
nsv1039284 CNV gain 25217958

Additional Variant Information for SNORD14D Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD14D

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD14D Gene

Disorders for SNORD14D Gene

Additional Disease Information for SNORD14D

No disorders were found for SNORD14D Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD14D Gene

Publications for SNORD14D Gene

  1. Mouse U14 snRNA is encoded in an intron of the mouse cognate hsc70 heat shock gene. (PMID: 2251119) Liu J … Maxwell ES (Nucleic acids research 1990) 2 3 58
  2. Structure and expression of a human gene coding for a 71 kd heat shock 'cognate' protein. (PMID: 3037489) Dworniczak B … Mirault ME (Nucleic acids research 1987) 2 3 58
  3. Phylogenetic analysis of the stress-70 protein family. (PMID: 7545947) Rensing SA … Maier UG (Journal of molecular evolution 1994) 3 58

Products for SNORD14D Gene

Sources for SNORD14D Gene

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