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Aliases for SNORD105B Gene

Subcategory (RNA class) for SNORD105B Gene


Quality Score for this RNA gene is


Aliases for SNORD105B Gene

  • Small Nucleolar RNA, C/D Box 105B 2 3 5

External Ids for SNORD105B Gene

ORGUL Members for SNORD105B Gene

Previous GeneCards Identifiers for SNORD105B Gene

  • GC02U901150
  • GC19P010221
  • GC19P009822
  • GC19P010228

Summaries for SNORD105B Gene

GeneCards Summary for SNORD105B Gene

SNORD105B (Small Nucleolar RNA, C/D Box 105B) is an RNA Gene, and is affiliated with the undefined RNA class.

Additional gene information for SNORD105B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD105B Gene

Genomics for SNORD105B Gene

GeneHancer (GH) Regulatory Elements for SNORD105B Gene

Promoters and enhancers for SNORD105B Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I010197 Enhancer 0.9 Ensembl ENCODE 11.4 +90.0 89959 4.2 GATAD2A ZNF362 L3MBTL2 NR4A1 CEBPB ZMYM3 CEBPG ZNF384 ZBTB40 ZNF316 C19orf66 ANGPTL6 S1PR2 MRPL4 ICAM1 EIF3G P2RY11 SNORD105B PPAN PPAN-P2RY11
GH19I010138 Enhancer 0.5 ENCODE 12.5 +28.8 28821 1 HIC1 POLR2A RCOR1 CHD2 P2RY11 SNORD105B SNORD105 PPAN PPAN-P2RY11 ANGPTL6 EIF3G GC19M010177 DNMT1
GH19I010141 Enhancer 0.4 ENCODE 12.5 +33.4 33359 2.2 PAF1 POLR2A C19orf66 ANGPTL6 EIF3G SNORD105B P2RY11 SNORD105 PPAN PPAN-P2RY11 RDH8 COL5A3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD105B on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD105B gene promoter:

Genomic Locations for SNORD105B Gene

Genomic Locations for SNORD105B Gene
92 bases
Plus strand

Genomic View for SNORD105B Gene

Genes around SNORD105B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD105B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD105B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD105B Gene

Proteins for SNORD105B Gene

Post-translational modifications for SNORD105B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD105B Gene

Domains & Families for SNORD105B Gene

Gene Families for SNORD105B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD105B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD105B Gene

Function for SNORD105B Gene

Phenotypes From GWAS Catalog for SNORD105B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD105B Gene

Localization for SNORD105B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD105B Gene

Pathways & Interactions for SNORD105B Gene

SuperPathways for SNORD105B Gene

No Data Available

Interacting Proteins for SNORD105B Gene

Gene Ontology (GO) - Biological Process for SNORD105B Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD105B Gene

Drugs & Compounds for SNORD105B Gene

No Compound Related Data Available

Transcripts for SNORD105B Gene

mRNA/cDNA for SNORD105B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD105B Gene

No ASD Table

Relevant External Links for SNORD105B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD105B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD105B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD105B Gene:

genes like me logo Genes that share expression patterns with SNORD105B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD105B Gene

Orthologs for SNORD105B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD105B Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia snoU105B 34
  • 97 (a)
(Bos Taurus)
Mammalia snoU105B 34
  • 88 (a)
(Canis familiaris)
Mammalia snoU105B 34
  • 83 (a)
(Mus musculus)
Mammalia Gm23008 34
  • 70 (a)
(Anolis carolinensis)
Reptilia snoU105B 34
  • 65 (a)
Species where no ortholog for SNORD105B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD105B Gene

Gene Tree for SNORD105B (if available)
Gene Tree for SNORD105B (if available)

Paralogs for SNORD105B Gene

No data available for Paralogs for SNORD105B Gene

Variants for SNORD105B Gene

Sequence variations from dbSNP and Humsavar for SNORD105B Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000302985 -- 10,109,677(+) C/G upstream_transcript_variant
rs1001462745 -- 10,109,292(+) G/A/C/T upstream_transcript_variant
rs1002810752 -- 10,108,551(+) T/C upstream_transcript_variant
rs1003777981 -- 10,108,865(+) T/C upstream_transcript_variant
rs1003913797 -- 10,109,469(+) C/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD105B Gene

Variant ID Type Subtype PubMed ID
nsv833743 CNV loss 17160897

Additional Variant Information for SNORD105B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD105B Gene

Disorders for SNORD105B Gene

Additional Disease Information for SNORD105B

No disorders were found for SNORD105B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD105B Gene

Publications for SNORD105B Gene

  1. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58
  2. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang JH … Qu LH (Nucleic acids research 2006) 3 58

Products for SNORD105B Gene

Sources for SNORD105B Gene

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