Aliases for SNORA71A Gene

Subcategory (RNA class) for SNORA71A Gene


Number of RNA Genes sources:

4 / 17

Aliases for SNORA71A Gene

  • Small Nucleolar RNA, H/ACA Box 71A 2 3 5
  • SNORA71A 2 5 170
  • RNA, U71A Small Nucleolar 2 3
  • U71a 2 3
  • SNODB1035 177
  • SNODB95 177
  • RF00056 168
  • RNU71A 3

External Ids for SNORA71A Gene

Previous HGNC Symbols for SNORA71A Gene

  • RNU71A

Previous GeneCards Identifiers for SNORA71A Gene

  • GC20M036498
  • GC20M036502
  • GC20M037056
  • GC20M033790
  • GC20M037059
  • GC20M037067
  • GC20M037075
  • GC20M037087

Summaries for SNORA71A Gene

GeneCards Summary for SNORA71A Gene

SNORA71A (Small Nucleolar RNA, H/ACA Box 71A) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA71A Gene

  • Small nucleolar RNA SNORA71

Additional gene information for SNORA71A Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA71A Gene

Genomics for SNORA71A Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for SNORA71A Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA71A on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the SNORA71A gene promoter:
  • COMP1
  • Elk-1
  • GATA-1
  • GR
  • GR-alpha
  • GR-beta
  • POU3F2
  • YY1

Genomic Locations for SNORA71A Gene

Genomic Locations for SNORA71A Gene
138 bases
Minus strand
138 bases
Minus strand

Genomic View for SNORA71A Gene

Genes around SNORA71A on UCSC Golden Path with GeneCards custom track
SNORA71A in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
SNORA71A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA71A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA71A Gene

Proteins for SNORA71A Gene

Post-translational modifications for SNORA71A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA71A Gene

Domains & Families for SNORA71A Gene

Gene Families for SNORA71A Gene

genes like me logo Genes that share domains with SNORA71A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA71A Gene

Function for SNORA71A Gene

Phenotypes From GWAS Catalog for SNORA71A Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA71A Gene

Localization for SNORA71A Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for SNORA71A gene
Compartment Confidence
cytoskeleton 1
nucleus 1

Gene Ontology (GO) - Cellular Components for SNORA71A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005730 nucleolus IEA --
genes like me logo Genes that share ontologies with SNORA71A: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from the Human Protein Atlas (HPA) for SNORA71A Gene

Pathways & Interactions for SNORA71A Gene

PathCards logo

SuperPathways for SNORA71A Gene

No Data Available

Gene Ontology (GO) - Biological Process for SNORA71A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006396 RNA processing IEA --
genes like me logo Genes that share ontologies with SNORA71A: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORA71A Gene

Drugs & Compounds for SNORA71A Gene

No Compound Related Data Available

Transcripts for SNORA71A Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for SNORA71A Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002B3FE4_9606 snoRNA 138 5

HGNC: 10232,

RefSeq: NR_002911,

snoDB: SNODB95,

snOPY: Homo_sapiens300486,

ENA: Y11165.1:1..138:ncRNA,

URS00006EC784_9606 snoRNA 134 3

Ensembl: ENST00000364729 (view in UCSC) ,

Rfam: RF00056,

snoDB: SNODB1035,

SNORA71A in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for SNORA71A Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA71A Gene

No ASD Table

Relevant External Links for SNORA71A Gene

GeneLoc Exon Structure for

Expression for SNORA71A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORA71A Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for SNORA71A

SOURCE GeneReport for Unigene cluster for SNORA71A Gene:

genes like me logo Genes that share expression patterns with SNORA71A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA71A Gene

Orthologs for SNORA71A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA71A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORA71 31
  • 98 (a)
(Bos Taurus)
Mammalia SNORA71 31
  • 82 (a)
(Ornithorhynchus anatinus)
Mammalia SNORA71 31
  • 81 (a)
(Monodelphis domestica)
Mammalia SNORA71 31
  • 78 (a)
(Mus musculus)
Mammalia Gm24258 31
  • 65 (a)
(Canis familiaris)
Mammalia SNORA71 31
  • 62 (a)
(Gallus gallus)
Aves SNORA71 31
  • 76 (a)
(Anolis carolinensis)
Reptilia SNORA71 31
  • 72 (a)
(Danio rerio)
Actinopterygii SNORA71 31 31
  • 72 (a)
Species where no ortholog for SNORA71A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for SNORA71A Gene

Gene Tree for SNORA71A (if available)
Gene Tree for SNORA71A (if available)

Paralogs for SNORA71A Gene

No data available for Paralogs for SNORA71A Gene

Variants for SNORA71A Gene

Additional dbSNP identifiers (rs#s) for SNORA71A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORA71A Gene

Variant ID Type Subtype PubMed ID
esv2758794 CNV gain 17122850
esv35121 CNV gain 17911159
esv6859 CNV loss 19470904
nsv1058457 CNV loss 25217958
nsv1063495 CNV gain 25217958
nsv509769 CNV insertion 20534489
nsv817893 CNV gain 17921354
nsv9809 CNV loss 18304495

Additional Variant Information for SNORA71A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for SNORA71A Gene

Disorders for SNORA71A Gene

Additional Disease Information for SNORA71A

No disorders were found for SNORA71A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA71A Gene

Publications for SNORA71A Gene

  1. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. (PMID: 9106664) Ganot P … Kiss T (Genes & development 1997) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3
  3. Human box H/ACA pseudouridylation guide RNA machinery. (PMID: 15199136) Kiss AM … Kiss T (Molecular and cellular biology 2004) 3

Products for SNORA71A Gene

Sources for SNORA71A Gene