Aliases for SNORA70J Gene

Subcategory (RNA class) for SNORA70J Gene

snoRNA

Number of RNA Genes sources:

2 / 14

Aliases for SNORA70J Gene

  • Small Nucleolar RNA, H/ACA Box 70J 2 3 5
  • SNORA70L1 174
  • SNORA70J 2
  • RF00156 172

External Ids for SNORA70J Gene

Previous GeneCards Identifiers for SNORA70J Gene

  • GC05P171390
  • GC05P171393
  • GC05P171396
  • GC00U936763
  • GC05U902872
  • GC05P171378
  • GC05P171381
  • GC05P171384
  • GC05P171388

Summaries for SNORA70J Gene

GeneCards Summary for SNORA70J Gene

SNORA70J (Small Nucleolar RNA, H/ACA Box 70J) is an RNA Gene, and is affiliated with the snoRNA class.

Rfam classification for SNORA70J Gene

  • Small nucleolar RNA SNORA70

Additional gene information for SNORA70J Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for SNORA70J Gene

Genomics for SNORA70J Gene

GeneHancer (GH) Regulatory Elements for SNORA70J Gene

Promoters and enhancers for SNORA70J Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around SNORA70J on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORA70J Gene

Genomic Locations for SNORA70J Gene
chr5:171,366,118-171,366,252
(GRCh38/hg38)
Size:
135 bases
Orientation:
Plus strand
chr5:170,793,122-170,793,256
(GRCh37/hg19)
Size:
135 bases
Orientation:
Plus strand

Genomic View for SNORA70J Gene

Genes around SNORA70J on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORA70J Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORA70J Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORA70J Gene

Proteins for SNORA70J Gene

Post-translational modifications for SNORA70J Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORA70J Gene

Domains & Families for SNORA70J Gene

Gene Families for SNORA70J Gene

genes like me logo Genes that share domains with SNORA70J: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for SNORA70J Gene

Function for SNORA70J Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORA70J Gene

Localization for SNORA70J Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORA70J Gene

Pathways & Interactions for SNORA70J Gene

PathCards logo

SuperPathways for SNORA70J Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for SNORA70J Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for SNORA70J Gene

Drugs & Compounds for SNORA70J Gene

No Compound Related Data Available

Transcripts for SNORA70J Gene

mRNA/cDNA for SNORA70J Gene

1 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :
1 snOPY transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORA70J Gene

No ASD Table

Relevant External Links for SNORA70J Gene

GeneLoc Exon Structure for
SNORA70J

Expression for SNORA70J Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORA70J Gene

Orthologs for SNORA70J Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORA70J Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORA70 31
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORA70 31
  • 76 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORA70 31
  • 70 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm24236 31
  • 67 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORA70 31
  • 62 (a)
ManyToMany
Species where no ortholog for SNORA70J was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORA70J Gene

ENSEMBL:
Gene Tree for SNORA70J (if available)
TreeFam:
Gene Tree for SNORA70J (if available)

Paralogs for SNORA70J Gene

No data available for Paralogs for SNORA70J Gene

Variants for SNORA70J Gene

Additional dbSNP identifiers (rs#s) for SNORA70J Gene

Additional Variant Information for SNORA70J Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORA70J

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORA70J Gene

Disorders for SNORA70J Gene

Additional Disease Information for SNORA70J

No disorders were found for SNORA70J Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORA70J Gene

Publications for SNORA70J Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 54

No data available for Mastermind for SNORA70J Gene

Products for SNORA70J Gene

Sources for SNORA70J Gene